G120974


Basic Information

Item Value
gene id G120974
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 4087159 ~ 4087472 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU151589
ctcgtttggtgtccattaataactaagtgatcaaggatcctatccagtctgtttgtgaatgttcccaaattgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaatttccatttgtgtccccggctgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttgaatcaagtccccatgtagtctcctctgttccagggtgaaaaggttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151589 True 314 lncRNA 0.46 1 4087159 4087472

Neighbor

gene id symbol gene type direction distance location
AMCG00002123 pax7a,pax7,pax7b,LOC107708260 coding upstream 29539 4053794 ~ 4057620 (+)
AMCG00002126 pax7 coding upstream 53607 4032134 ~ 4033552 (+)
AMCG00002125 NA coding upstream 66016 4020228 ~ 4021143 (+)
AMCG00002124 pax7a,pax7,LOC107708260,LOC105907504 coding upstream 99316 3983670 ~ 3987843 (+)
AMCG00002119 NA coding upstream 189235 3886487 ~ 3897924 (+)
AMCG00002127 park7,LOC107657982,LOC107701995 coding downstream 7878 4095350 ~ 4101806 (+)
AMCG00002128 kcnab2,LOC106565914,LOC101463812,LOC102294726,LOC107701994,LOC108231619 coding downstream 67074 4154546 ~ 4154923 (+)
AMCG00002129 LOC108434650,LOC107672035,LOC107706553,LOC107592856,LOC107701994 coding downstream 88160 4175632 ~ 4175847 (+)
AMCG00002130 kcnab2a,LOC108431628,LOC108255041 coding downstream 105188 4192660 ~ 4219877 (+)
AMCG00002135 NA coding downstream 467206 4554678 ~ 4557375 (+)
G120961 NA non-coding upstream 146443 3940456 ~ 3940716 (+)
G120928 NA non-coding upstream 295218 3788716 ~ 3791941 (+)
G120827 NA non-coding upstream 584232 3500337 ~ 3502927 (+)
G120823 NA non-coding upstream 593092 3491280 ~ 3494067 (+)
G120794 NA non-coding upstream 970735 3113450 ~ 3116424 (+)
G121044 NA non-coding downstream 493382 4580854 ~ 4581879 (+)
G121045 NA non-coding downstream 494501 4581973 ~ 4582280 (+)
G121114 NA non-coding downstream 661656 4749128 ~ 4752334 (+)
G121176 NA non-coding downstream 1113930 5201402 ~ 5202462 (+)
G121178 dhrs3 non-coding downstream 1115377 5202849 ~ 5204614 (+)
AMCG00002098 NA other upstream 544982 3533814 ~ 3542177 (+)
G120742 NA other upstream 1127684 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 1233032 2852154 ~ 2854127 (+)
G120518 NA other upstream 2146343 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 3094395 682670 ~ 992764 (+)
AMCG00002152 NA other downstream 1131358 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 2499182 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 3306328 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 4651299 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 5756733 9844205 ~ 9851312 (+)

Expression


Co-expression Network