G120975


Basic Information

Item Value
gene id G120975
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 4087108 ~ 4087418 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU151590
tcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcagccggggacacaaatggaaattgggcttcaaggcattcaagacagaaaacaggagacacttcttcacacagagaggcgtcacaatctgaacaaactccccagcgatgtggctgaagagacaatttgggaacattcacaaacagactggataggatccttgatcacttagttattaatggacaccaaacgagcacgatggggcgaatggcctcctctcgattggacactgtcttatgttctta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151590 True 311 lncRNA 0.47 1 4087108 4087418

Neighbor

gene id symbol gene type direction distance location
AMCG00002120 mrps16 coding downstream 140553 3945137 ~ 3946555 (-)
AMCG00002122 NA coding downstream 166767 3919233 ~ 3920341 (-)
AMCG00002121 NA coding downstream 168921 3911198 ~ 3918187 (-)
AMCG00002117 NA coding downstream 252281 3826176 ~ 3834827 (-)
AMCG00002118 NA coding downstream 262938 3817822 ~ 3824170 (-)
AMCG00002131 NA coding upstream 132584 4220002 ~ 4253397 (-)
AMCG00002132 glut1a,LOC106583009,LOC106565867,LOC107569806,LOC107666081,LOC107549315 coding upstream 326864 4414282 ~ 4423276 (-)
AMCG00002136 NA coding upstream 483558 4570976 ~ 4579172 (-)
AMCG00002139 NA coding upstream 506734 4594152 ~ 4600114 (-)
AMCG00002138 NA coding upstream 514988 4602406 ~ 4636492 (-)
G120914 NA non-coding downstream 382744 3700492 ~ 3704364 (-)
G120853 NA non-coding downstream 546282 3538762 ~ 3540826 (-)
G120849 NA non-coding downstream 550583 3535822 ~ 3536525 (-)
G120842 NA non-coding downstream 584180 3500281 ~ 3502928 (-)
G120841 NA non-coding downstream 593058 3492956 ~ 3494050 (-)
G121039 NA non-coding upstream 480021 4567439 ~ 4569294 (-)
G121111 NA non-coding upstream 629174 4716592 ~ 4722181 (-)
G121151 lrrc38,lrrc38b,LOC107691331,LOC107568719,LOC107555684,LOC108281009,LOC107685631 non-coding upstream 1023184 5110602 ~ 5116017 (-)
G121152 NA non-coding upstream 1040620 5128038 ~ 5137006 (-)
G121188 NA non-coding upstream 1140256 5227674 ~ 5228131 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 300564 3784236 ~ 3786544 (-)
G120907 NA other downstream 370856 3713867 ~ 3716252 (-)
AMCG00002097 NA other downstream 620647 3407485 ~ 3466461 (-)
AMCG00002091 LOC103354943,LOC102299287,LOC101482394,LOC108441428 other downstream 900755 3173505 ~ 3186353 (-)
AMCG00002094 vamp3,LOC107582408 other downstream 958668 3113442 ~ 3128440 (-)
G120993 NA other upstream 127297 4214715 ~ 4219877 (-)
AMCG00002167 NA other upstream 1888307 5975725 ~ 6015393 (-)
AMCG00002223 NA other upstream 3739223 7826641 ~ 7839411 (-)
AMCG00002265 NA other upstream 5521332 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 5670007 9757425 ~ 9801108 (-)

Expression


Co-expression Network