G121044


Basic Information

Item Value
gene id G121044
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 4580854 ~ 4581879 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU151687
GCTCTGTATTTGTTgggtaattttttttattttaggtaacctgtttaaaacaatagaaatgaaaaaatatcaaagcactgtacataaaatgtgttacatatatatatacatatacatataaataaaatacaatatttagaaTCCATTCCTGAGATGTATTGTTTAAACACTCTCAGTTGCCGTCACCGGGTCAGATTTTGTAAATGGATGCTCCAGGGAAAGGCGATGTCAAAAGGAACaaaatttcagtttaaaaactaGACCGACTACccaaatatattaacattttagtttGATTCATACACTAGACCTACTGGAAATTTTCACTCATAACATTACatgttttcatgaaaacatgtaatttaaatcTTTGACAGCCATTTAGGAGGGTTTTCATTCTATGGTCTGTACTTTTCTGAATATATTCAAAGCTATTCCTCAGGCGTTctcagtgttttaatgttttaataattgtgCTCCAGAGTACCTCAAACATGACAGCTGCTTTTGCTTAAGTAGCATTATTGGAAAGAGCAGTGTAGATAAGTCCATATGGAAGTTATTAAATACTGACACTCTGTGTTCAGAGTACAATTAGTAATCTGATGAATTAAGTTACtgcataaatatatgtttaaaacgTTTAGAGAACTTCAAACGAGGTTATTTATCCCCATCCGAAGAAAATGGTTTCTCAATTGTTCAGCCGTGAAATGTGCGCCGTCAGCTTGATGAGAACAAGAGACAGGCCGCCTCCGACCGCCGCTCCCCGTCTCAGTCTCGGCTGTGCGCTGGGTCTGACTTTGGCGAAGGGCCGAAGCTGGGGCCTCGCGCTCCTTCTTCCCACTCGTAGCAGTGGTTGACGCGGGCCGGACTCAGGGAACAGTCCAGCTCCTCTGTGAACTCTGTGTAGTGCTCAATCAGGGCCCTGATGCTGTCAAACTCTTTGTGGAGGTCCTAGAgtttgaacaaacaaacacagaacgGTAAGTTAAAAACACAGTCCttgttcatatttaataatat

Function

NR:

description
glyceraldehyde 3-phosphate dehydrogenase

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU151687 True 1026 lncRNA 0.39 1 4580854 4581879

Neighbor

gene id symbol gene type direction distance location
AMCG00002134 NA coding upstream 11586 4562912 ~ 4569268 (+)
AMCG00002135 NA coding upstream 23479 4554678 ~ 4557375 (+)
AMCG00002130 kcnab2a,LOC108431628,LOC108255041 coding upstream 360977 4192660 ~ 4219877 (+)
AMCG00002129 LOC108434650,LOC107672035,LOC107706553,LOC107592856,LOC107701994 coding upstream 405007 4175632 ~ 4175847 (+)
AMCG00002128 kcnab2,LOC106565914,LOC101463812,LOC102294726,LOC107701994,LOC108231619 coding upstream 425931 4154546 ~ 4154923 (+)
AMCG00002133 NA coding downstream 2556 4584435 ~ 4586858 (+)
AMCG00002140 LOC107727752 coding downstream 109087 4690966 ~ 4721931 (+)
AMCG00002143 NA coding downstream 206633 4788512 ~ 4791668 (+)
AMCG00002145 LOC102295218,LOC102203423,LOC101487531,LOC102781222 coding downstream 381175 4963054 ~ 4967720 (+)
AMCG00002146 ephb2 coding downstream 415666 4997545 ~ 5000508 (+)
G120974 NA non-coding upstream 493382 4087159 ~ 4087472 (+)
G120961 NA non-coding upstream 640138 3940456 ~ 3940716 (+)
G120928 NA non-coding upstream 788913 3788716 ~ 3791941 (+)
G120827 NA non-coding upstream 1077927 3500337 ~ 3502927 (+)
G120823 NA non-coding upstream 1086787 3491280 ~ 3494067 (+)
G121045 NA non-coding downstream 94 4581973 ~ 4582280 (+)
G121114 NA non-coding downstream 167249 4749128 ~ 4752334 (+)
G121176 NA non-coding downstream 619523 5201402 ~ 5202462 (+)
G121178 dhrs3 non-coding downstream 620970 5202849 ~ 5204614 (+)
G121187 NA non-coding downstream 645795 5227674 ~ 5228099 (+)
AMCG00002098 NA other upstream 1038677 3533814 ~ 3542177 (+)
G120742 NA other upstream 1621379 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 1726727 2852154 ~ 2854127 (+)
G120518 NA other upstream 2640038 1924022 ~ 1940816 (+)
AMCG00002019 NA other upstream 3588090 682670 ~ 992764 (+)
AMCG00002152 NA other downstream 636951 5218830 ~ 5226656 (+)
AMCG00002190 acot7 other downstream 2004775 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 2811921 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 4156892 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 5262326 9844205 ~ 9851312 (+)

Expression


Co-expression Network