G121152


Basic Information

Item Value
gene id G121152
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 5128038 ~ 5137006 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU151836
CCAGGGGCTTGTTGTGCGCTGGAGGACACGGCAGATCCCCGGGCAGGGCGGTCCGGGACTGGGGGAGCGGCATCTACGCGCACTAGGACCGGCACAGCCCAGCAACACACATCGCCACACACAGTGATGCAATCATCCCACACATAAGGGACACCAATCCGGCCGGTGGGTGCTTGTCCTGCAATGCCAACAGTGTGCGGGCAAGTGAGACTGGCACAGCAGCAGGTGCATTGCATGAAGCCCACAAATAAAGTGCGTTGTGCGCCggctctgctgtgtgtgtgtcgctgCTGCTCTGCAGGgaagtgcagtgtgtgtctccTCGGCTCCCCTTGTAGATGTCAGTGTCATAAAGCAGGCAGATCTGCTTCCTTGTGTCTCCAGGACTTCCAACAAGGCTCTTCCTGTGAAGCCCCGCCGCACACATGACCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151836 True 432 lncRNA 0.60 2 5128038 5137006

Neighbor

gene id symbol gene type direction distance location
AMCG00002144 lactbl1,LOC106582988,LOC106565891 coding downstream 316676 4797389 ~ 4811362 (-)
AMCG00002142 NA coding downstream 375706 4749168 ~ 4752332 (-)
AMCG00002141 NA coding downstream 380599 4741489 ~ 4747439 (-)
AMCG00002137 NA coding downstream 454686 4651295 ~ 4673352 (-)
AMCG00002138 NA coding downstream 491546 4602406 ~ 4636492 (-)
AMCG00002154 dhrs3,LOC106582983 coding upstream 64412 5201418 ~ 5214408 (-)
AMCG00002153 NA coding upstream 115369 5252375 ~ 5254786 (-)
AMCG00002155 igsf21,LOC108438574 coding upstream 127001 5264007 ~ 5286782 (-)
AMCG00002158 NA coding upstream 623828 5760834 ~ 5786032 (-)
AMCG00002157 LOC106565901,LOC108438575,LOC104956748,LOC102783840,LOC107751159 coding upstream 667836 5804842 ~ 5827525 (-)
G121151 lrrc38,lrrc38b,LOC107691331,LOC107568719,LOC107555684,LOC108281009,LOC107685631 non-coding downstream 12021 5110602 ~ 5116017 (-)
G121111 NA non-coding downstream 405857 4716592 ~ 4722181 (-)
G121039 NA non-coding downstream 558744 4567439 ~ 4569294 (-)
G120975 NA non-coding downstream 1040620 4087108 ~ 4087418 (-)
G120914 NA non-coding downstream 1423674 3700492 ~ 3704364 (-)
G121188 NA non-coding upstream 90668 5227674 ~ 5228131 (-)
G121271 NA non-coding upstream 720995 5858001 ~ 5861642 (-)
G121274 NA non-coding upstream 734662 5871668 ~ 5874136 (-)
G121288 NA non-coding upstream 796652 5933658 ~ 5937833 (-)
G121384 NA non-coding upstream 1073579 6210585 ~ 6213660 (-)
G120993 NA other downstream 908161 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 1341494 3784236 ~ 3786544 (-)
G120907 NA other downstream 1411786 3713867 ~ 3716252 (-)
AMCG00002097 NA other downstream 1661577 3407485 ~ 3466461 (-)
AMCG00002091 LOC103354943,LOC102299287,LOC101482394,LOC108441428 other downstream 1941685 3173505 ~ 3186353 (-)
AMCG00002167 NA other upstream 838719 5975725 ~ 6015393 (-)
AMCG00002223 NA other upstream 2689635 7826641 ~ 7839411 (-)
AMCG00002265 NA other upstream 4471744 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 4620419 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 4693513 9830519 ~ 9833224 (-)

Expression


Co-expression Network