Gene
RNA
| Item | Value |
|---|---|
| gene id | G121176 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 5201402 ~ 5202462 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU151862 | True | 889 | lncRNA | 0.41 | 2 | 5201402 | 5202462 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002150 | vps13d | coding | upstream | 5309 | 5128059 ~ 5196093 (+) |
| AMCG00002149 | lrrc38,LOC107685631,LOC106582984 | coding | upstream | 111530 | 5084895 ~ 5089872 (+) |
| AMCG00002147 | LOC106565894,LOC106582986 | coding | upstream | 164617 | 5034310 ~ 5036785 (+) |
| AMCG00002148 | ephb2,LOC104917933,LOC108439490,LOC102781222 | coding | upstream | 178718 | 5014750 ~ 5022684 (+) |
| AMCG00002146 | ephb2 | coding | upstream | 200894 | 4997545 ~ 5000508 (+) |
| AMCG00002151 | NA | coding | downstream | 35849 | 5238311 ~ 5240700 (+) |
| AMCG00002159 | NA | coding | downstream | 567790 | 5770252 ~ 5776525 (+) |
| AMCG00002156 | rcc2,LOC107687402,LOC107712686 | coding | downstream | 658976 | 5861438 ~ 5872711 (+) |
| AMCG00002161 | NA | coding | downstream | 711809 | 5914271 ~ 5916094 (+) |
| AMCG00002160 | NA | coding | downstream | 717164 | 5919626 ~ 5938059 (+) |
| G121114 | NA | non-coding | upstream | 449068 | 4749128 ~ 4752334 (+) |
| G121045 | NA | non-coding | upstream | 619122 | 4581973 ~ 4582280 (+) |
| G121044 | NA | non-coding | upstream | 619523 | 4580854 ~ 4581879 (+) |
| G120974 | NA | non-coding | upstream | 1113930 | 4087159 ~ 4087472 (+) |
| G120961 | NA | non-coding | upstream | 1260686 | 3940456 ~ 3940716 (+) |
| G121178 | dhrs3 | non-coding | downstream | 387 | 5202849 ~ 5204614 (+) |
| G121187 | NA | non-coding | downstream | 25212 | 5227674 ~ 5228099 (+) |
| G121198 | NA | non-coding | downstream | 41247 | 5243709 ~ 5275923 (+) |
| G121228 | NA | non-coding | downstream | 271674 | 5474136 ~ 5570247 (+) |
| G121402 | NA | non-coding | downstream | 1075056 | 6277518 ~ 6277900 (+) |
| AMCG00002098 | NA | other | upstream | 1659225 | 3533814 ~ 3542177 (+) |
| G120742 | NA | other | upstream | 2241927 | 2956908 ~ 2959475 (+) |
| AMCG00002076 | NA | other | upstream | 2347275 | 2852154 ~ 2854127 (+) |
| G120518 | NA | other | upstream | 3260586 | 1924022 ~ 1940816 (+) |
| AMCG00002019 | NA | other | upstream | 4208638 | 682670 ~ 992764 (+) |
| AMCG00002152 | NA | other | downstream | 16368 | 5218830 ~ 5226656 (+) |
| AMCG00002190 | acot7 | other | downstream | 1384192 | 6586654 ~ 6602608 (+) |
| AMCG00002215 | NA | other | downstream | 2191338 | 7393800 ~ 7411230 (+) |
| AMCG00002245 | NA | other | downstream | 3536309 | 8738771 ~ 8792478 (+) |
| AMCG00002272 | NA | other | downstream | 4641743 | 9844205 ~ 9851312 (+) |
