G121187


Basic Information

Item Value
gene id G121187
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 5227674 ~ 5228099 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU151880
GGGCATCCCCGTCTCCTGGTACCATGTTTCCGATGGCTTCCATGGGATCGTGAGCTTCATGGACCAAGGCTGGCTGTCCTTCCCTTCGACCAAACCGGCCGTGAACAGCATTGTGAACTATGTGAAGACTCTTTGAAATGGGACAGTGTGCACAGAAATTTTAAGTCTCATGTCTCTTTACATGATAATACTTGCAATTAAATGAAGTATCTTATCTGATGTGTTAATTTATATAAAGGATCATCCAACAACTTAATATGTGAAGCTCATGAACactacagtatttgtttatcTCTGGggatacaaatatatagacTCATAGATCTTGGGTATTATTTAAATGCCTGATCTTGAACTTATcctgtttttcaaatgtgaCGCACAAATTGAACAGCACACTATATcaataaaatctaataaatcTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151880 True 426 lncRNA 0.38 1 5227674 5228099

Neighbor

gene id symbol gene type direction distance location
AMCG00002150 vps13d coding upstream 31581 5128059 ~ 5196093 (+)
AMCG00002149 lrrc38,LOC107685631,LOC106582984 coding upstream 137802 5084895 ~ 5089872 (+)
AMCG00002147 LOC106565894,LOC106582986 coding upstream 190889 5034310 ~ 5036785 (+)
AMCG00002148 ephb2,LOC104917933,LOC108439490,LOC102781222 coding upstream 204990 5014750 ~ 5022684 (+)
AMCG00002146 ephb2 coding upstream 227166 4997545 ~ 5000508 (+)
AMCG00002151 NA coding downstream 10212 5238311 ~ 5240700 (+)
AMCG00002159 NA coding downstream 542153 5770252 ~ 5776525 (+)
AMCG00002156 rcc2,LOC107687402,LOC107712686 coding downstream 633339 5861438 ~ 5872711 (+)
AMCG00002161 NA coding downstream 686172 5914271 ~ 5916094 (+)
AMCG00002160 NA coding downstream 691527 5919626 ~ 5938059 (+)
G121178 dhrs3 non-coding upstream 23060 5202849 ~ 5204614 (+)
G121176 NA non-coding upstream 25212 5201402 ~ 5202462 (+)
G121114 NA non-coding upstream 475340 4749128 ~ 4752334 (+)
G121045 NA non-coding upstream 645394 4581973 ~ 4582280 (+)
G121044 NA non-coding upstream 645795 4580854 ~ 4581879 (+)
G121198 NA non-coding downstream 15610 5243709 ~ 5275923 (+)
G121228 NA non-coding downstream 246037 5474136 ~ 5570247 (+)
G121402 NA non-coding downstream 1049419 6277518 ~ 6277900 (+)
G121417 NA non-coding downstream 1099098 6327197 ~ 6327481 (+)
G121526 NA non-coding downstream 1564877 6792976 ~ 6798043 (+)
AMCG00002152 NA other upstream 1018 5218830 ~ 5226656 (+)
AMCG00002098 NA other upstream 1685497 3533814 ~ 3542177 (+)
G120742 NA other upstream 2268199 2956908 ~ 2959475 (+)
AMCG00002076 NA other upstream 2373547 2852154 ~ 2854127 (+)
G120518 NA other upstream 3286858 1924022 ~ 1940816 (+)
AMCG00002190 acot7 other downstream 1358555 6586654 ~ 6602608 (+)
AMCG00002215 NA other downstream 2165701 7393800 ~ 7411230 (+)
AMCG00002245 NA other downstream 3510672 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 4616106 9844205 ~ 9851312 (+)
AMCG00002294 rere other downstream 5339813 10567912 ~ 10604839 (+)

Expression


Co-expression Network