G121188


Basic Information

Item Value
gene id G121188
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 5227674 ~ 5228131 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU151881
GTCGGGTTAAGGACATGACAAAGACATTCTTGTAAgatttattagattttattgATATAGTGTGCTGTTCAATTTGTGCGtcacatttgaaaaacaggATAAGTTCAAGATCAGGCATTTAAATAATACCCAAGATCTATGAgtctatatatttgtatccCCAGAgataaacaaatactgtagtGTTCATGAGCTTCACATATTAAGTTGTTGGATGATCCTTTATATAAATTAACACATCAGATAAGATACTTCATTTAATTGCAAGTATTATCATGTAAAGAGACATGAGACTTAAAATTTCTGTGCACACTGTCCCATTTCAAAGAGTCTTCACATAGTTCACAATGCTGTTCACGGCCGGTTTGGTCGAAGGGAAGGACAGCCAGCCTTGGTCCATGAAGCTCACGATCCCATGGAAGCCATCGGAAACATGGTACCAGGAGACGGGGATGCCC

Function

NR:

description
nucleosome-remodeling factor subunit BPTF-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151881 True 458 lncRNA 0.38 1 5227674 5228131

Neighbor

gene id symbol gene type direction distance location
AMCG00002154 dhrs3,LOC106582983 coding downstream 13266 5201418 ~ 5214408 (-)
AMCG00002144 lactbl1,LOC106582988,LOC106565891 coding downstream 416312 4797389 ~ 4811362 (-)
AMCG00002142 NA coding downstream 475342 4749168 ~ 4752332 (-)
AMCG00002141 NA coding downstream 480235 4741489 ~ 4747439 (-)
AMCG00002137 NA coding downstream 554322 4651295 ~ 4673352 (-)
AMCG00002153 NA coding upstream 24244 5252375 ~ 5254786 (-)
AMCG00002155 igsf21,LOC108438574 coding upstream 35876 5264007 ~ 5286782 (-)
AMCG00002158 NA coding upstream 532703 5760834 ~ 5786032 (-)
AMCG00002157 LOC106565901,LOC108438575,LOC104956748,LOC102783840,LOC107751159 coding upstream 576711 5804842 ~ 5827525 (-)
AMCG00002166 NA coding upstream 646651 5874782 ~ 5883711 (-)
G121152 NA non-coding downstream 90668 5128038 ~ 5137006 (-)
G121151 lrrc38,lrrc38b,LOC107691331,LOC107568719,LOC107555684,LOC108281009,LOC107685631 non-coding downstream 111657 5110602 ~ 5116017 (-)
G121111 NA non-coding downstream 505493 4716592 ~ 4722181 (-)
G121039 NA non-coding downstream 658380 4567439 ~ 4569294 (-)
G120975 NA non-coding downstream 1140256 4087108 ~ 4087418 (-)
G121271 NA non-coding upstream 629870 5858001 ~ 5861642 (-)
G121274 NA non-coding upstream 643537 5871668 ~ 5874136 (-)
G121288 NA non-coding upstream 705527 5933658 ~ 5937833 (-)
G121384 NA non-coding upstream 982454 6210585 ~ 6213660 (-)
G121403 NA non-coding upstream 1049337 6277468 ~ 6277902 (-)
G120993 NA other downstream 1007797 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 1441130 3784236 ~ 3786544 (-)
G120907 NA other downstream 1511422 3713867 ~ 3716252 (-)
AMCG00002097 NA other downstream 1761213 3407485 ~ 3466461 (-)
AMCG00002091 LOC103354943,LOC102299287,LOC101482394,LOC108441428 other downstream 2041321 3173505 ~ 3186353 (-)
AMCG00002167 NA other upstream 747594 5975725 ~ 6015393 (-)
AMCG00002223 NA other upstream 2598510 7826641 ~ 7839411 (-)
AMCG00002265 NA other upstream 4380619 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 4529294 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 4602388 9830519 ~ 9833224 (-)

Expression


Co-expression Network