G121722


Basic Information

Item Value
gene id G121722
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 7829807 ~ 7834211 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU152562
gatcaaatacttttttccctcactgtatgtatgtatgaatatataggtatagatacatttatatatgtgtgtatgtataaaataataaatctcaCTTTATTTTGTCAGAAACGGAAGATGCCTATACAGGTGAAAGCAGTGATTACAGTATTCACAGcaatagcccCCTGGGGGTCTGATCAGGCACCTTGTCCTCCACCCGGGAAGGCTGACGAGGCACCACCCATCCCAGAGGGCAGATGAGGTACCCCACCACGGAGGGCTGACGGTGCATCCACACCCCGAGGGCTGACGAGGGGCCCCCGCCAGAGAGAAGGCCACAGCCAGTAGCACTGTTTAAGAACTTTTGCAGCTGTCTCACAGAATTATACTATGGGTATAATCTGGGGTCCTGGGGTCATGACCCAAAAACTCACGTGGATGTTCCTGAGGACTGAGCAGCAgtgtttgattgcctggggtctgtcggacacGGTAGTAGAcactattcagttggcgagagctccctctacgaggtctctgtattcctaccactggcaGACGTTTCGCAGCTGGTGCCAAGATGGAGCTGGAGGTTCAGCTGCAGCTTCTGGCTGTGGACCTGATGGACTTCTTCTCATCCTGCTGTCTGCACCCTGAGGCTGTTGTGCAGACCCCACACATCTGCAAATATGATCTTGACCTATTGTTATACATTGATGTAATTTGCAGGTGTTACAGATCCTTCATAGACCACCTCTCTAAATCCAAGCATTTGATATtgattgatattgatattttcaTGAATTTCATCACCTAGTAGTTAATCCGACACTAATTCCAGTACAAacttttcagatttaatttgataatgCGTTTATACAACAGTATTCTCCATACACACATCTAGCTCATATGAATATTGAAATCAGGAAAGCCAGAGCCGTATAACGTTATATTACTTAATTGTTgttcataaataataacaagaaataaTCAATTGAGGGTTAAATTGatgttgctttatttattttgtagagaaaacaaagcaataactGCAGCTTGTCtctcaccccaccccacccacaaaTAGGCCCTATTGGTAGattcaatataatgtatttactacaaataaaatacaatttaaataaacacattcatagaataatatttattgaacTGGTGAtggataataaaaataatgatcacaGGGAGTTCATTGCAATCGATAACATTTTAGTATAGAGCTGGGGACTAATACCAGTAGCCAGTGTTGCCATTGGTGTTAAGACTGCACTAATTTAGTACAGTGCTCCGTACTAACCACAGGACCATTCTGTATGCAGCTTTCAGTTTGTGGCATATTTGATTAACTTATGTTGAAAATAAGTCCTGTAATTATAATCCTGCTATGCTTGttagttaatttattaatattatgacaCCTGGATGTTTATAGCTTTTGGAAGTCACTTTGATTATCACTGGGTTTAAGTTGTGTACTCCATGCAGTAGCATTCAtagagtatatttatttatatataactccATTTCAACTGTGAACAGCTTCTGATGTAAATCTCACAATTGCACCAACAGAAGTCAGCGAAAACCTCTAATGCTCTTCCCTTTATTCTGGGCTTAGAGAACTGAAATAGTTCTAGTTTGTACAGGAAGATAAGGATTTTATTGTAGTTCAGTCATTCTGGTGTACCAGTAGTAAACTGACCTCTAGGGTGATACGTTTATAAgcaaaaacctttttttaacattgtatacTAGACTACACATCTCCacaatttcagttatttttaagcaGTATGATATTCCTGTTCAGcaaagtatgtatttaaagtgtttgaTATTGTTTCAACAAAATATAACGTTGTTGATAGCTAAATaggggtgtgtgtctgtaaacTAGTTTACACATTCAGTGAGAGCTTTGAATATCAAACTCCattgctattgtttgttttcagctgcAAAACATTGTTCTCTACTAGTAAGTACGTTTTTGAAAGCTATAATTTTTTAGTGCATTTTTCACATCCATTACTAGATTTTTAGGATAACAATtctatatttattgttaatatataaaaaatgcaaggTTTATAATGGATAAGGTTTCCACATGAGCGATTGATatgaaaaagtcaaattaataaaataagcaaatagtTTAGGGAAcaggaacaaataaaatattaaagttaaatattcTGTGAAgaactggatgtttttccctgtgtgtctgtgtgaacaaggtcactgtctcactgtctcactgtgttatagttcaaccctgattcTTAGAAGAGTCAGATAAGAACCAGGTTTCACCAGCAAACTGGGCTTGATACATCCAACAAGCCCCCCTAATATTCAACATTACATATGCCCTCATTTTAATCCCTTGTTTTaactatatatgggtcttccgAACTTCCACTCATCATGGGACAGACGTGGGCATTGtgatctttctctcctgtccggtctgcataaaagtgcctttactttgtaacttctctaagactgttcttgagattgcctcttgaacacATCTTCCTTTGTAATAAATTCCTCttgattgaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152562 True 2582 lncRNA 0.38 2 7829807 7834211

Neighbor

gene id symbol gene type direction distance location
AMCG00002217 NA coding upstream 166118 7658258 ~ 7663689 (+)
AMCG00002216 NA coding upstream 439156 7382538 ~ 7390651 (+)
AMCG00002213 plch2,LOC107602463 coding upstream 451367 7325990 ~ 7378440 (+)
AMCG00002214 plch2,LOC107691057,LOC107710777,LOC107748961,LOC107595766 coding upstream 505906 7318975 ~ 7323901 (+)
AMCG00002211 mthfr coding upstream 638692 7178439 ~ 7191115 (+)
AMCG00002224 NA coding downstream 93379 7927590 ~ 7937933 (+)
AMCG00002232 NA coding downstream 146093 7980304 ~ 8010540 (+)
AMCG00002231 NA coding downstream 182682 8016893 ~ 8022378 (+)
AMCG00002236 NA coding downstream 293986 8128197 ~ 8151854 (+)
AMCG00002235 NA coding downstream 327115 8161326 ~ 8178947 (+)
G121688 ski,LOC106572818 non-coding upstream 181491 7646718 ~ 7648316 (+)
G121680 NA non-coding upstream 267075 7561066 ~ 7562732 (+)
G121526 NA non-coding upstream 1031764 6792976 ~ 6798043 (+)
G121417 NA non-coding upstream 1502326 6327197 ~ 6327481 (+)
G121402 NA non-coding upstream 1551907 6277518 ~ 6277900 (+)
G121741 NA non-coding downstream 76347 7910558 ~ 7917243 (+)
G121767 NA non-coding downstream 111154 7945365 ~ 7953624 (+)
G121862 NA non-coding downstream 982119 8816330 ~ 8816553 (+)
G121981 NA non-coding downstream 1414106 9248317 ~ 9313334 (+)
G121999 NA non-coding downstream 1708404 9542615 ~ 9562591 (+)
AMCG00002215 NA other upstream 418577 7393800 ~ 7411230 (+)
AMCG00002190 acot7 other upstream 1227199 6586654 ~ 6602608 (+)
AMCG00002152 NA other upstream 2603151 5218830 ~ 5226656 (+)
AMCG00002098 NA other upstream 4287630 3533814 ~ 3542177 (+)
G120742 NA other upstream 4870332 2956908 ~ 2959475 (+)
AMCG00002245 NA other downstream 904560 8738771 ~ 8792478 (+)
AMCG00002272 NA other downstream 2009994 9844205 ~ 9851312 (+)
AMCG00002294 rere other downstream 2733701 10567912 ~ 10604839 (+)
AMCG00002296 NA other downstream 2880588 10714799 ~ 10753893 (+)
AMCG00002310 NA other downstream 3523341 11357552 ~ 11359840 (+)

Expression


Co-expression Network