G121875


Basic Information

Item Value
gene id G121875
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 8825431 ~ 8859003 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU152800
AAGTGGCATCTGCACAAGCTTTCCGTGCatcTCTGATCTGGTTCTTGAGCTGCTCAGCCTCCTGGCGCAGCTGGTCGAGTTCGCTCATTTTCCTCTGCTAAACGGTATGGTTCACTCCTGCTGCCGGGACACTCACGGATCTGTTCTCAGTCAGAGGTGTCCGTGGTTTGTATCGCATTGACTGGAGACACAGTGAAGTATCCTCTCCTCTCCGCTCCGCACCAACCGACCGACAGACAGACTTCACCGAGGAGCGACACTCCCGAACCCAGCTTTCGACACGCCGAGGGGGGACACACCGGCACAAAGATGGGGCAGGGTTCACCGCAGCAAAGGCAAATAGTGGCGATAAGGCGCTTGGTTTGAGGGTCCTGCGCTGCTGCAGACGGGCTCGGTCCTTCTCCGCTTCTCTAGCCTCGCTGGtcgctctcactctctcgctctcttcgCCACTCTTTCTCGGTTCTCTCCGGCACCTCAGTCGCTTCCTCCGGCCATCAAACAGCAGAGATGGGCGCGGTAACCCTGCACTCGGCTCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152800 True 541 lncRNA 0.59 3 8825431 8859003

Neighbor

gene id symbol gene type direction distance location
AMCG00002240 calml6 coding downstream 11840 8810319 ~ 8813591 (-)
AMCG00002239 gabrd,LOC107690714,LOC107711789,LOC107684467 coding downstream 105314 8712465 ~ 8720117 (-)
AMCG00002238 NA coding downstream 116494 8706529 ~ 8708937 (-)
AMCG00002237 ajap1 coding downstream 302601 8496082 ~ 8522830 (-)
AMCG00002234 NA coding downstream 798407 8022677 ~ 8027024 (-)
AMCG00002247 NA coding upstream 39622 8898625 ~ 8903588 (-)
AMCG00002249 mmp23b,LOC106572002 coding upstream 74966 8933969 ~ 8946187 (-)
AMCG00002251 mib2 coding upstream 98107 8957110 ~ 8982144 (-)
AMCG00002252 mib2 coding upstream 136699 8995702 ~ 9005887 (-)
AMCG00002248 ubiad1 coding upstream 159604 9018607 ~ 9022271 (-)
G121789 NA non-coding downstream 808356 8016064 ~ 8017075 (-)
G121754 NA non-coding downstream 980115 7830193 ~ 7845316 (-)
G121718 NA non-coding downstream 1161754 7662986 ~ 7663677 (-)
G121716 NA non-coding downstream 1166580 7657832 ~ 7658851 (-)
G121689 NA non-coding downstream 1262684 7561077 ~ 7562747 (-)
G121885 NA non-coding upstream 9642 8868645 ~ 8870698 (-)
G121912 NA non-coding upstream 73160 8932163 ~ 8933163 (-)
G121935 NA non-coding upstream 159123 9018126 ~ 9018327 (-)
G122019 NA non-coding upstream 279444 9138447 ~ 9213429 (-)
G122037 NA non-coding upstream 424966 9283969 ~ 9287587 (-)
AMCG00002223 NA other downstream 986020 7826641 ~ 7839411 (-)
AMCG00002167 NA other downstream 2810038 5975725 ~ 6015393 (-)
G120993 NA other downstream 4605554 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 5038887 3784236 ~ 3786544 (-)
G120907 NA other downstream 5109179 3713867 ~ 3716252 (-)
AMCG00002265 NA other upstream 749747 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 898422 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 971516 9830519 ~ 9833224 (-)
AMCG00002279 NA other upstream 977915 9836918 ~ 9853075 (-)
AMCG00002288 NA other upstream 1410886 10269889 ~ 10279984 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location