G122037


Basic Information

Item Value
gene id G122037
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 9283969 ~ 9287587 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU152989
GATTTATTTCCTGATTCCCACACCAGATAACAAGTCTGCACTGCACATGTATAGCATAGTGTTAAACCagatttattacaattatatacatttttattttttttccaatatcaGAAGTTTATACACAGTCACAATTACCAGCTGACAGTATTTGTTCTCAGTTATGAACcgtacagcaaaaaaaaaaaaaaaactgtttggaaAAAGGCAAAAATCGCACATCTAGAATCCCCAGCATGCAGTGCATTTCAAACTGCTACCCAATTCAGCCTACAATTTGAGTGGCACGGTCAGACGCTACTTGTAGGCTCACGGTGCTGAAGTATGTGGCGTGTCATCAGTGCCATCACAGCGGGCGCTTTCCCAGAGTTCACTTGGTGTAACAAGCCTTTTCCTGGCAGGGGCAACAGACACGCTGGGAGCAGGCTCCCTAGCTCCTACTTATTTGCAGTGATGTGAATCCAGGCAGTATCTGTTCGATGagtgaaaacaataaagaagcaTAAACCTTCAGATAGACACAcgctcactcacacactgatcTGATGGCCGCATAAGGGGGACAAAGAAAATCAGTTTGTGCTGATATCATAGTTAATCCTGCAAGTTTAAGAGATCCACAAGGTAAACTTACTGGGCCAGCCATGCAATAATGTTGCACCAAAACTGCGTTTGcatgggaaaataataatcataattaaaaaataataatcaagccAGTTATTGTACAGGGCACTAGTTCTATGCTTGTTTTCCGGAAGGTCAAAATGCATATTACATAATACagaaaattaatataatcatgGCTATAGTAATGGCAGAGGATGGAAATAAAATTAGGTGCGGGAAggggagaagaaaataaaaataaagaaggtAATTGTGTGAACTAGTCCACCTCGCTCTCGTTGCTGGCCCCCTCTGGGCGCCGCAGTTTGTCCACGTGTTCGTTTATCTGTCCGTCTCCACCTCGCCGGTCCTCCCGCTGCACGCTCAGGTGGTCCTCTTCATCCACGTGGCTCACGTCGTCGTCTTCgtcctcttcctcatcctcgTCGTCctcttccttcttctcctcctcgcCTTGGACCTCCATCCTCACCTGGTCTTTAACATCCAGGGTCAGCGTGCCGGCCAGCCCTCCGTCGACACCCAGAGCGTGTGGCCCAGCCTGGGCGCCCTCGGGACTGTGGCCCTCCTTCACAGGCGAGGAGGAGACCGACTCGTTGCTGACGGGCGAGATGTCggagctgctgttgttgtggttgatGGATGGGGAGCTAGACAGCGTTGCCGGCTTCACAGGGATTTGCCATGACGGGATCTTGGGAGCTGAGGGAGATGCAGGGAACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152989 True 1354 lncRNA 0.47 2 9283969 9287587

Neighbor

gene id symbol gene type direction distance location
AMCG00002259 NA coding downstream 75270 9200586 ~ 9208699 (-)
AMCG00002260 NA coding downstream 90540 9193199 ~ 9193429 (-)
AMCG00002250 NA coding downstream 222874 9055314 ~ 9061095 (-)
AMCG00002248 ubiad1 coding downstream 261698 9018607 ~ 9022271 (-)
AMCG00002252 mib2 coding downstream 278082 8995702 ~ 9005887 (-)
AMCG00002263 NA coding upstream 21829 9309416 ~ 9356970 (-)
AMCG00002271 NA coding upstream 341063 9628650 ~ 9629679 (-)
AMCG00002267 NA coding upstream 342543 9630130 ~ 9637266 (-)
AMCG00002270 pgd,LOC107716232,LOC107681986 coding upstream 355659 9643246 ~ 9650610 (-)
AMCG00002269 kif1b coding upstream 373921 9661508 ~ 9692975 (-)
G122019 NA non-coding downstream 70540 9138447 ~ 9213429 (-)
G121935 NA non-coding downstream 265642 9018126 ~ 9018327 (-)
G121912 NA non-coding downstream 350806 8932163 ~ 8933163 (-)
G121885 NA non-coding downstream 413271 8868645 ~ 8870698 (-)
G121875 NA non-coding downstream 424966 8825431 ~ 8859003 (-)
G122061 tardbp,LOC107716231,LOC107586522 non-coding upstream 333441 9621028 ~ 9621472 (-)
G122131 NA non-coding upstream 560648 9848235 ~ 9851376 (-)
G122226 NA non-coding upstream 935626 10223213 ~ 10224982 (-)
G122302 NA non-coding upstream 1462824 10750411 ~ 10750781 (-)
G122319 NA non-coding upstream 1524599 10812186 ~ 10813876 (-)
AMCG00002223 NA other downstream 1444558 7826641 ~ 7839411 (-)
AMCG00002167 NA other downstream 3268576 5975725 ~ 6015393 (-)
G120993 NA other downstream 5064092 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 5497425 3784236 ~ 3786544 (-)
G120907 NA other downstream 5567717 3713867 ~ 3716252 (-)
AMCG00002265 NA other upstream 321163 9608750 ~ 9620127 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 469838 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 542932 9830519 ~ 9833224 (-)
AMCG00002279 NA other upstream 549331 9836918 ~ 9853075 (-)
AMCG00002288 NA other upstream 982302 10269889 ~ 10279984 (-)

Expression


Co-expression Network