G122302


Basic Information

Item Value
gene id G122302
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 10750411 ~ 10750781 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU153358
AACCCAGAGGATCTGGGAGACGGCGAGTGTCTGTCCACGCCTGGCCACCCGTCTGTGTGTCTttaaccccccccacctcctccagctccccccGCTCACCTGTGTGTACTCAGTGCAGCCAGACAAGCTGCCTATGAAGCCGCAGACCTCGTCCACTGTCCACTTGCTGATGTCCTCCATGGGCCCGGCCTCCTCACCGTCCAGGAACAGACCTCCCATGGTGCCTGGGGGGGAGAGAAGGAAACATAAATCATTAGGAGCCCACGTAGACAGCAGGCCCACGAGCTGAACGTCTTCCTCTGTACCACACATCTACATTAATGACCCTCTATTAAAGGGTTCAGCAGGGGTCAACTCCTGGGCCTCTTCCT

Function

NR:

description
PREDICTED: ubiquitin domain-containing protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153358 True 371 lncRNA 0.58 1 10750411 10750781

Neighbor

gene id symbol gene type direction distance location
AMCG00002292 NA coding downstream 346531 10391726 ~ 10403880 (-)
AMCG00002284 NA coding downstream 505626 10240092 ~ 10244785 (-)
AMCG00002281 NA coding downstream 510878 10225288 ~ 10239533 (-)
AMCG00002282 spsb1,LOC107716103,LOC107687410,LOC107703063,LOC107591103,LOC107737563,LOC103042472 coding downstream 552867 10189763 ~ 10197544 (-)
AMCG00002283 slc25a33,LOC107708828 coding downstream 657308 10079157 ~ 10093103 (-)
AMCG00002302 NA coding upstream 5051 10755832 ~ 10789955 (-)
AMCG00002303 NA coding upstream 176087 10926868 ~ 10929003 (-)
AMCG00002313 NA coding upstream 527645 11278426 ~ 11279133 (-)
AMCG00002312 NA coding upstream 542313 11293094 ~ 11304845 (-)
AMCG00002315 NA coding upstream 708282 11459063 ~ 11467699 (-)
G122226 NA non-coding downstream 525429 10223213 ~ 10224982 (-)
G122131 NA non-coding downstream 899035 9848235 ~ 9851376 (-)
G122061 tardbp,LOC107716231,LOC107586522 non-coding downstream 1128939 9621028 ~ 9621472 (-)
G122037 NA non-coding downstream 1462824 9283969 ~ 9287587 (-)
G122019 NA non-coding downstream 1536982 9138447 ~ 9213429 (-)
G122319 NA non-coding upstream 61405 10812186 ~ 10813876 (-)
G122376 NA non-coding upstream 516783 11267564 ~ 11274527 (-)
G122432 NA non-coding upstream 656743 11407524 ~ 11409586 (-)
G122438 NA non-coding upstream 698785 11449566 ~ 11449791 (-)
G122530 NA non-coding upstream 851191 11601972 ~ 11628435 (-)
AMCG00002288 NA other downstream 470427 10269889 ~ 10279984 (-)
AMCG00002279 NA other downstream 897336 9836918 ~ 9853075 (-)
AMCG00002276 NA other downstream 917187 9830519 ~ 9833224 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other downstream 949303 9757425 ~ 9801108 (-)
AMCG00002265 NA other downstream 1130284 9608750 ~ 9620127 (-)
AMCG00002301 NA other upstream 87023 10837804 ~ 10847201 (-)
AMCG00002317 plekhm2 other upstream 763219 11514000 ~ 11527918 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other upstream 897130 11647911 ~ 11685089 (-)
G122597 NA other upstream 980836 11731617 ~ 11734324 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other upstream 1097689 11848470 ~ 11854891 (-)

Expression


Co-expression Network