Gene
RNA
| Item | Value |
|---|---|
| gene id | G122438 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 11449566 ~ 11449791 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU153524 | True | 226 | lncRNA | 0.47 | 1 | 11449566 | 11449791 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002312 | NA | coding | downstream | 144721 | 11293094 ~ 11304845 (-) |
| AMCG00002313 | NA | coding | downstream | 170433 | 11278426 ~ 11279133 (-) |
| AMCG00002303 | NA | coding | downstream | 520563 | 10926868 ~ 10929003 (-) |
| AMCG00002302 | NA | coding | downstream | 659611 | 10755832 ~ 10789955 (-) |
| AMCG00002292 | NA | coding | downstream | 1045686 | 10391726 ~ 10403880 (-) |
| AMCG00002315 | NA | coding | upstream | 9272 | 11459063 ~ 11467699 (-) |
| AMCG00002319 | NA | coding | upstream | 34968 | 11484759 ~ 11505246 (-) |
| AMCG00002318 | NA | coding | upstream | 56084 | 11505875 ~ 11509991 (-) |
| AMCG00002322 | NA | coding | upstream | 81487 | 11531278 ~ 11532015 (-) |
| AMCG00002321 | LOC106582762 | coding | upstream | 83759 | 11533550 ~ 11541279 (-) |
| G122432 | NA | non-coding | downstream | 39980 | 11407524 ~ 11409586 (-) |
| G122376 | NA | non-coding | downstream | 175039 | 11267564 ~ 11274527 (-) |
| G122319 | NA | non-coding | downstream | 635690 | 10812186 ~ 10813876 (-) |
| G122302 | NA | non-coding | downstream | 698785 | 10750411 ~ 10750781 (-) |
| G122226 | NA | non-coding | downstream | 1224584 | 10223213 ~ 10224982 (-) |
| G122530 | NA | non-coding | upstream | 152181 | 11601972 ~ 11628435 (-) |
| G122548 | NA | non-coding | upstream | 264618 | 11714409 ~ 11716145 (-) |
| G122551 | NA | non-coding | upstream | 268739 | 11718530 ~ 11718969 (-) |
| G122632 | NA | non-coding | upstream | 394601 | 11844392 ~ 11845671 (-) |
| G122633 | NA | non-coding | upstream | 397290 | 11847081 ~ 11848192 (-) |
| AMCG00002301 | NA | other | downstream | 602365 | 10837804 ~ 10847201 (-) |
| AMCG00002288 | NA | other | downstream | 1169582 | 10269889 ~ 10279984 (-) |
| AMCG00002279 | NA | other | downstream | 1596491 | 9836918 ~ 9853075 (-) |
| AMCG00002276 | NA | other | downstream | 1616342 | 9830519 ~ 9833224 (-) |
| AMCG00002275 | ube4b,LOC107681967,LOC107570768 | other | downstream | 1648458 | 9757425 ~ 9801108 (-) |
| AMCG00002317 | plekhm2 | other | upstream | 64209 | 11514000 ~ 11527918 (-) |
| AMCG00002327 | spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 | other | upstream | 198120 | 11647911 ~ 11685089 (-) |
| G122597 | NA | other | upstream | 281826 | 11731617 ~ 11734324 (-) |
| AMCG00002350 | tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 | other | upstream | 398679 | 11848470 ~ 11854891 (-) |
| AMCG00002351 | NA | other | upstream | 419816 | 11869607 ~ 11872862 (-) |
