G122470


Basic Information

Item Value
gene id G122470
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11525232 ~ 11528098 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU153568
CGTCTCATCCTCGCAGGCGGCGAAGTAACTCTGGagcTTTTGACCGAGAGAGAGATGTTCTCCAGGATGCGGTCTTTGACTTTCAGTTGATCCATGTCTGGAGGTCTCCTGGCCCGCCTACGGTGAGATCGATGGGGCTGCCGCAGACTGTCCACTGTCCCGACGGCGAGGCAGACGCAGTCAGAGAcgaggggggagagggaggcagtCCACGCCGCTTTTCCTTTCCGTTTATCCGGCTCTCTTCTCTATCTGTCTCTGGTGTTGACTCTTTGCGAGGTCACGCCGTCTTGGGACTCTTTCATCTGCGCCCCCGGTCTCCGGCCGAGCAGCACAGAAAGCATGCGATACAATACctacaataataaaaaccctaatacagtatttacagaAGAAAGCCACACAAATAAACCCCCTGCTAGGATGTGTGGGAAAGACCGCTCAATACGAAACTGAATAAATTGCTGAAACAATCATTTAAAGCACGGATGCAATAACACTGACGTAAACGAACAGCTACTACGGCATCTCCAGTGTTTGAATAATATAGCTTATATATACGagaaagtttgtattattagcCGATTATAATTCAGatcttttatgtttatttttaaatatggcaGTTAAATCCCCAAGCTgctatattattgttatatatttattaactatGACAGCTTACGCTTGTTGTTGTCGCTGCTGCTGCTCGGGTCAAGTGCTGTCAAAACGAGCCGTGGAATCTGTCACTCACCCGGGCGAATTCCAGAATGTGTGGTTCTATTTCTTGCGTTCTTTTCGGAGCTTTCCTGCCTGCTTTTTTAGGGGGGTTGCTATGTTACTGTTCTCGCCGCCCGTCTTCGGTTCTGCGGTAGTCCTTTAACAGGCTGCACACGATGGGGATGAAATAAAAACTCAGATGCACAGACTGCCCGGCCTCTAGGTCCATTTTCATATCTACCGCTGTGTTATAATAATACTGACGGTATTAATGTTGACCTAACATCGAAagtcaaagctttttttttttttagctgggCATTCAAGATGAGCATAACGCGtttcaaaaccatttatttCCTGCGAGCTTGGAGCTGCTGTTGACCGAGCGCAGAAAATAAATGCCAGTGCTTTTAATGTCCCACGCATAGTCCCGTAACATAACcgaagatgcatttaaataaagataatagtttaaaaataatactgcagACTGGGTTGGTGTGTACCCAGTGTCTCTGAGAGCCGCT

Function

GO:

id name namespace
GO:0050780 dopamine receptor binding molecular_function
GO:0001664 G protein-coupled receptor binding molecular_function
GO:0031752 D5 dopamine receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153568 True 1247 lncRNA 0.46 2 11525232 11528098

Neighbor

gene id symbol gene type direction distance location
AMCG00002314 NA coding upstream 118768 11392955 ~ 11406464 (+)
AMCG00002307 LOC105898973,LOC106572187,LOC103032744 coding upstream 253903 11255732 ~ 11271329 (+)
AMCG00002309 NA coding upstream 280252 11214084 ~ 11244980 (+)
AMCG00002308 NA coding upstream 323231 11144009 ~ 11202001 (+)
AMCG00002306 NA coding upstream 384545 11127459 ~ 11140687 (+)
AMCG00002316 NA coding downstream 36911 11565009 ~ 11587894 (+)
AMCG00002323 NA coding downstream 74112 11602210 ~ 11612235 (+)
AMCG00002325 NA coding downstream 95683 11623781 ~ 11628341 (+)
AMCG00002324 zbtb17 coding downstream 108715 11636813 ~ 11644784 (+)
AMCG00002329 NA coding downstream 203507 11731605 ~ 11738113 (+)
G122469 NA non-coding upstream 1610 11523227 ~ 11523622 (+)
G122468 NA non-coding upstream 2118 11522872 ~ 11523114 (+)
G122467 NA non-coding upstream 2601 11522174 ~ 11522631 (+)
G122417 NA non-coding upstream 54707 11457644 ~ 11470525 (+)
G122389 NA non-coding upstream 176594 11334931 ~ 11348638 (+)
G122471 NA non-coding downstream 2788 11530886 ~ 11533460 (+)
G122478 NA non-coding downstream 15006 11543104 ~ 11543621 (+)
G122501 NA non-coding downstream 157334 11685432 ~ 11686318 (+)
G122549 NA non-coding downstream 188257 11716355 ~ 11716701 (+)
G122592 NA non-coding downstream 328380 11856478 ~ 11857326 (+)
AMCG00002311 ttll10 other upstream 145664 11365614 ~ 11379568 (+)
AMCG00002310 NA other upstream 165392 11357552 ~ 11359840 (+)
AMCG00002296 NA other upstream 771339 10714799 ~ 10753893 (+)
AMCG00002294 rere other upstream 920393 10567912 ~ 10604839 (+)
AMCG00002272 NA other upstream 1673920 9844205 ~ 9851312 (+)
G122482 NA other downstream 100914 11629012 ~ 11630892 (+)
AMCG00002331 NA other downstream 160502 11688600 ~ 11694165 (+)
AMCG00002339 NA other downstream 182352 11710450 ~ 11715372 (+)
G122582 NA other downstream 307341 11835439 ~ 11836169 (+)
AMCG00002355 NA other downstream 366375 11894473 ~ 11898701 (+)

Expression


Co-expression Network