Gene
RNA
| Item | Value |
|---|---|
| gene id | G122582 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 11835439 ~ 11836169 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016458 | gene silencing | biological_process |
| GO:0031047 | gene silencing by RNA | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU153704 | True | 731 | TUCP | 0.56 | 1 | 11835439 | 11836169 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002342 | atad3a,LOC103357928 | coding | upstream | 21799 | 11805698 ~ 11813640 (+) |
| AMCG00002341 | NA | coding | upstream | 34932 | 11798284 ~ 11800507 (+) |
| AMCG00002340 | NA | coding | upstream | 37705 | 11793620 ~ 11797734 (+) |
| AMCG00002343 | NA | coding | upstream | 42569 | 11791414 ~ 11792870 (+) |
| AMCG00002330 | NA | coding | upstream | 68848 | 11751651 ~ 11766591 (+) |
| AMCG00002344 | NA | coding | downstream | 1691 | 11837860 ~ 11845019 (+) |
| AMCG00002354 | NA | coding | downstream | 68704 | 11904873 ~ 11905805 (+) |
| AMCG00002353 | NA | coding | downstream | 83497 | 11919666 ~ 11922866 (+) |
| AMCG00002356 | NA | coding | downstream | 97456 | 11933625 ~ 11959805 (+) |
| AMCG00002362 | NA | coding | downstream | 131206 | 11967375 ~ 11983436 (+) |
| G122549 | NA | non-coding | upstream | 118738 | 11716355 ~ 11716701 (+) |
| G122501 | NA | non-coding | upstream | 149121 | 11685432 ~ 11686318 (+) |
| G122478 | NA | non-coding | upstream | 291818 | 11543104 ~ 11543621 (+) |
| G122471 | NA | non-coding | upstream | 301979 | 11530886 ~ 11533460 (+) |
| G122470 | NA | non-coding | upstream | 307341 | 11525232 ~ 11528098 (+) |
| G122592 | NA | non-coding | downstream | 20309 | 11856478 ~ 11857326 (+) |
| G122737 | NA | non-coding | downstream | 268501 | 12104670 ~ 12105523 (+) |
| G122743 | NA | non-coding | downstream | 292211 | 12128380 ~ 12129678 (+) |
| G122744 | NA | non-coding | downstream | 293709 | 12129878 ~ 12130747 (+) |
| G122829 | NA | non-coding | downstream | 536632 | 12372801 ~ 12373031 (+) |
| AMCG00002339 | NA | other | upstream | 120067 | 11710450 ~ 11715372 (+) |
| AMCG00002331 | NA | other | upstream | 141274 | 11688600 ~ 11694165 (+) |
| G122482 | NA | other | upstream | 204547 | 11629012 ~ 11630892 (+) |
| AMCG00002311 | ttll10 | other | upstream | 455871 | 11365614 ~ 11379568 (+) |
| AMCG00002310 | NA | other | upstream | 475599 | 11357552 ~ 11359840 (+) |
| AMCG00002355 | NA | other | downstream | 58304 | 11894473 ~ 11898701 (+) |
| AMCG00002360 | NA | other | downstream | 175802 | 12011971 ~ 12016084 (+) |
| G122746 | NA | other | downstream | 297617 | 12133786 ~ 12140465 (+) |
| AMCG00002390 | NA | other | downstream | 1195590 | 13031759 ~ 13051971 (+) |
| AMCG00002388 | NA | other | downstream | 1208524 | 13044693 ~ 13070832 (+) |
