G122592


Basic Information

Item Value
gene id G122592
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11856478 ~ 11857326 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU153714
ttgcatattcagtACATCAAAAGCAGCCGTTTCAAATTCACAAGTTTAAAACCTGAATTTCAAGTGGGAACATATTTTTGAATTTCCCCATTCTGTCCATCAAATATTCAGCTTCAGAATGTAAGGTTTTGACTGGTTTAAAATAACAGGttagatacatttatttggttgaacttatatgaaaaaaaactgttacaaaTGTTAGCAATAATAATAGGAGATTTccctgtaaaaacaaaacttgccAAGCTGAACATGTTCTAGTGTGAAGAACAGAATGGGGGAAATGTCCACACATGTTCAAGTTTGTATGTCAGacaaaatattgtatgtttCTGTAAGAAAAAGGGCAACATACATTCAGAAtgacaaatatttcccaaatacaattttcagtataaggaacaaacaaatacattctaaTGTGTACAGCAAACATTTTTTCCTTTAGATGCAATTATAATGCCTAAATGAACACTGACGGCTGAAAGAGTaagtttaaatgaaaacattcttgCAAGTGGACCATGTTTCAGCTTGGCAAATCTATTTTTATGATAAacataaaatgacaaattacaaacataaaataaagagcTTCCATTCTGTTCTAGCACACATGCTGCTTAACACTGGCCAACCACTCTAACAACTAATAACAGGCCCTATGTACTGATATACAAGAAgagttacaaaataaatgctttaagtGTGACCAGCTGGCATTGGGAATCATCGAGATCAGCGGTCTCCAACCTTTTTTTAACTTTGATAGCTCTGAGATGTTCCGCGGGCTTTGGGTGGGTAGGTGGGGGTGGCGGTTGCTGACGCTATTTTCTCTGCTATGac

Function

GO: NA

KEGG:

id description
ko00900 Terpenoid backbone biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU153714 True 849 lncRNA 0.35 1 11856478 11857326

Neighbor

gene id symbol gene type direction distance location
AMCG00002344 NA coding upstream 11459 11837860 ~ 11845019 (+)
AMCG00002342 atad3a,LOC103357928 coding upstream 42838 11805698 ~ 11813640 (+)
AMCG00002341 NA coding upstream 55971 11798284 ~ 11800507 (+)
AMCG00002340 NA coding upstream 58744 11793620 ~ 11797734 (+)
AMCG00002343 NA coding upstream 63608 11791414 ~ 11792870 (+)
AMCG00002354 NA coding downstream 47547 11904873 ~ 11905805 (+)
AMCG00002353 NA coding downstream 62340 11919666 ~ 11922866 (+)
AMCG00002356 NA coding downstream 76299 11933625 ~ 11959805 (+)
AMCG00002362 NA coding downstream 110049 11967375 ~ 11983436 (+)
AMCG00002364 NA coding downstream 133631 11990957 ~ 11992957 (+)
G122549 NA non-coding upstream 139777 11716355 ~ 11716701 (+)
G122501 NA non-coding upstream 170160 11685432 ~ 11686318 (+)
G122478 NA non-coding upstream 312857 11543104 ~ 11543621 (+)
G122471 NA non-coding upstream 323018 11530886 ~ 11533460 (+)
G122470 NA non-coding upstream 328380 11525232 ~ 11528098 (+)
G122737 NA non-coding downstream 247344 12104670 ~ 12105523 (+)
G122743 NA non-coding downstream 271054 12128380 ~ 12129678 (+)
G122744 NA non-coding downstream 272552 12129878 ~ 12130747 (+)
G122829 NA non-coding downstream 515475 12372801 ~ 12373031 (+)
G122830 NA non-coding downstream 547616 12404942 ~ 12411141 (+)
G122582 NA other upstream 20309 11835439 ~ 11836169 (+)
AMCG00002339 NA other upstream 141106 11710450 ~ 11715372 (+)
AMCG00002331 NA other upstream 162313 11688600 ~ 11694165 (+)
G122482 NA other upstream 225586 11629012 ~ 11630892 (+)
AMCG00002311 ttll10 other upstream 476910 11365614 ~ 11379568 (+)
AMCG00002355 NA other downstream 37147 11894473 ~ 11898701 (+)
AMCG00002360 NA other downstream 154645 12011971 ~ 12016084 (+)
G122746 NA other downstream 276460 12133786 ~ 12140465 (+)
AMCG00002390 NA other downstream 1174433 13031759 ~ 13051971 (+)
AMCG00002388 NA other downstream 1187367 13044693 ~ 13070832 (+)

Expression


Co-expression Network