G122597


Basic Information

Item Value
gene id G122597
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11731617 ~ 11734324 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU153720
CCTGTCTGTGTGCGcaggggtggtggtggtggagggcaGCGCCTTCTCTGGCTCGTCTTCAGGACTGGCGCTTCCCAGGATGCGCCTCCGGGCCTCTGCGTACTCCGCTTCGCGCTGCGCCAGCGACTTCACCTGAGGGTGGGGCCGCTGCGAAGGCAGTTGAGAGCCCAATGAGCCGTTACTGGACGGCCGCTTTAGGATGCGGAtctgtggtgggggggcagcgggGAGAGAGTCGTCCTGGATCACGATGCCGGTCTTCAAAGGAGAGCGGCTCGGCTTTTTCTCCTTCTGGCTGATCCTCAGCTTCTCCTCCAGTCGTCTGTCTATCTCCCCGCTGTCCGCTGCTTCTTCCCAACTCTCAGCAACCTCTTCATCTTCCATGTTCCAGCCTCCCCggacacacactctcacacacacatacacacacactagggGGAAGAGCCTCGGCTTCTGCGCAAGCGCAGGCGCACTCGCGACGTCTACCTCATCATCGCTGACAGAAGGAGGGAGGGGCGCGCACGTCTCTGCACGCACTCAGC

Function

GO: NA

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU153720 True 542 TUCP 0.63 3 11731617 11734324

Neighbor

gene id symbol gene type direction distance location
AMCG00002336 fbxo42,LOC107573139,LOC106565130 coding downstream 5666 11720216 ~ 11725951 (-)
AMCG00002335 NA coding downstream 20306 11708258 ~ 11711311 (-)
AMCG00002334 NA coding downstream 25922 11703336 ~ 11705695 (-)
AMCG00002333 NA coding downstream 30940 11694337 ~ 11700677 (-)
AMCG00002326 NA coding downstream 100708 11629149 ~ 11630909 (-)
AMCG00002338 NA coding upstream 32960 11767284 ~ 11772145 (-)
AMCG00002337 NA coding upstream 39272 11773596 ~ 11783638 (-)
AMCG00002348 LOC106928075,LOC100705239,LOC102211954,LOC103467007,LOC107092894,LOC101478036,LOC106947826,LOC105927147,LOC103150475 coding upstream 53178 11787502 ~ 11790736 (-)
AMCG00002346 NA coding upstream 66117 11800441 ~ 11803744 (-)
AMCG00002352 NA coding upstream 69730 11804054 ~ 11805639 (-)
G122551 NA non-coding downstream 12648 11718530 ~ 11718969 (-)
G122548 NA non-coding downstream 15472 11714409 ~ 11716145 (-)
G122530 NA non-coding downstream 103182 11601972 ~ 11628435 (-)
G122438 NA non-coding downstream 281826 11449566 ~ 11449791 (-)
G122432 NA non-coding downstream 322031 11407524 ~ 11409586 (-)
G122632 NA non-coding upstream 110068 11844392 ~ 11845671 (-)
G122633 NA non-coding upstream 112757 11847081 ~ 11848192 (-)
G122636 NA non-coding upstream 123067 11857391 ~ 11859325 (-)
G122621 NA non-coding upstream 128579 11862903 ~ 11864056 (-)
G122726 NA non-coding upstream 308991 12043315 ~ 12045019 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other downstream 46528 11647911 ~ 11685089 (-)
AMCG00002317 plekhm2 other downstream 203699 11514000 ~ 11527918 (-)
AMCG00002301 NA other downstream 884416 10837804 ~ 10847201 (-)
AMCG00002288 NA other downstream 1451633 10269889 ~ 10279984 (-)
AMCG00002279 NA other downstream 1878542 9836918 ~ 9853075 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other upstream 114146 11848470 ~ 11854891 (-)
AMCG00002351 NA other upstream 135283 11869607 ~ 11872862 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other upstream 261504 11995828 ~ 12006352 (-)
G122862 NA other upstream 1293873 13028197 ~ 13029406 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 1914903 13649227 ~ 13654247 (-)

Expression


Co-expression Network