G122726


Basic Information

Item Value
gene id G122726
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 12043315 ~ 12045019 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU153878
cctcgttttaactttttttatttgcattgtggTTAAGTCTATTGTAGTACAGTAAAATCAACAATAAACAGTATTGTATCCTACTGTGAGGTGGCTctgcaaattataattatttattgttacacAGATGGAAGGACCAGAATATAATTTcagttatgttattattatcctttaatttaatgaatggcCTGGCATTATGGTAAATAAACCATTCCCTAGCTATTTAGCTTCTTTGTATGTCTctcaataaatatgaataatatatcacattctGTGTAGTCCTCCATATGATGATTACatgtattacattacatataactgcgttacatatatgtattacacATAACtcccaaaatacattttcaatggtTTTCATTATAAAGTTCATGTACACCAAAGATCATTAATGAGACTTGTATTTCTCTGTTTCAAGAAAAAGCAACTTACTTACTAAATATCTTACTTCTTAAGCTTTTCATTCAGGTAACAATCAGCAAGATTTAGTTTTAGACAGTGAACATatgtgctttaattaaaatagctaATTAAGATATGCAATGCTGGTGCTAAAACTACTCATCAAAATAAGCTAAAACCTTACATtccttatacattttttttgcttgaccataaatgttttaatagccAGGGCTAGGAAGCATTGcacttcctttatttttaattcagcctCTGAACCTGAAGGACTGTAGGCATTTATGATTTATTCTTAATATATTCAGTACTTACTAATCATTTCctctgattaatatatatatatatgtatgtatgtatatatttatgcacaCTTGCCGATTTAAATATTAAGCTTGGCCAAGGAAAAAGAGCTACAAAATATTCTAAGACCTGGAAGGAATTTCTATTTTATCTCTAGTTACATAATCACATAATTAAGCCAATTAAGTAAAGGCGAACTCAGTTGAAAAGAAAACTAGGAGACACATCAATGCAAAGGACAATGAGTTTGACATCGCTGATAAACAGACATACACAAGAAGATATAATAATCAGGAAGGTACTGATAAGAGAGTGCTgttatttggttgtttttaaaaatgatcttAAAATGAGTGCTTTTGTGGAAAATTACTCTAACATTGGATTTATTTCTGCTGAACCATTAGGTTGTTTTGTCGTGTTTTCAGGATTCCTCTTTTTAATCCGGCAATACACAGTCATCAGAATCAAACAATGCATGCAAATGTTCCTCCCAGCACACCAGCAGTTAAGGTAATTGATGGCTTATCATTTTGTGTGTCTGGCTCAAAGTAGCAATCTCCATTCTTAGAACATGTACAAATGCCAACTAgtgataaaaacataaa

Function

GO: NA

KEGG:

id description
ko04976 Bile secretion
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU153878 True 1343 lncRNA 0.31 2 12043315 12045019

Neighbor

gene id symbol gene type direction distance location
AMCG00002359 NA coding downstream 125215 11913110 ~ 11918100 (-)
AMCG00002358 NA coding downstream 130300 11905910 ~ 11913015 (-)
AMCG00002357 capzb,LOC106583096,LOC106565651,LOC105897928 coding downstream 150616 11882073 ~ 11892699 (-)
AMCG00002345 NA coding downstream 173963 11864614 ~ 11869352 (-)
AMCG00002349 NA coding downstream 209492 11830472 ~ 11833823 (-)
AMCG00002367 NA coding upstream 10622 12055641 ~ 12060552 (-)
AMCG00002373 LOC101076725,LOC106573767,LOC106598349,LOC106598644,LOC106597130 coding upstream 37092 12082111 ~ 12096642 (-)
AMCG00002377 NA coding upstream 54305 12099324 ~ 12100920 (-)
AMCG00002375 NA coding upstream 79179 12124198 ~ 12139756 (-)
AMCG00002376 NA coding upstream 94986 12140005 ~ 12142344 (-)
G122621 NA non-coding downstream 179259 11862903 ~ 11864056 (-)
G122636 NA non-coding downstream 183990 11857391 ~ 11859325 (-)
G122633 NA non-coding downstream 195123 11847081 ~ 11848192 (-)
G122632 NA non-coding downstream 197644 11844392 ~ 11845671 (-)
G122551 NA non-coding downstream 324346 11718530 ~ 11718969 (-)
G122801 NA non-coding upstream 150901 12195920 ~ 12243914 (-)
G122858 NA non-coding upstream 955822 13000841 ~ 13005335 (-)
G122869 NA non-coding upstream 1007007 13052026 ~ 13052390 (-)
G122877 NA non-coding upstream 1022202 13067221 ~ 13067627 (-)
G122879 NA non-coding upstream 1023815 13068834 ~ 13069238 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 36963 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 170453 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 188424 11848470 ~ 11854891 (-)
G122597 NA other downstream 308991 11731617 ~ 11734324 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other downstream 358226 11647911 ~ 11685089 (-)
G122862 NA other upstream 983178 13028197 ~ 13029406 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 1604208 13649227 ~ 13654247 (-)
G123263 NA other upstream 2896241 14941260 ~ 14946311 (-)
G123585 NA other upstream 4791137 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 4913143 16958162 ~ 16974301 (-)

Expression


Co-expression Network