Gene
RNA
| Item | Value |
|---|---|
| gene id | G122737 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 12104670 ~ 12105523 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| multiple epidermal growth factor-like domains protein 8 isoform X2 |
| id | name | namespace |
|---|---|---|
| GO:0043254 | regulation of protein-containing complex assembly | biological_process |
| GO:0008154 | actin polymerization or depolymerization | biological_process |
| GO:1902903 | regulation of supramolecular fiber organization | biological_process |
| GO:0032956 | regulation of actin cytoskeleton organization | biological_process |
| GO:0007015 | actin filament organization | biological_process |
| GO:0032970 | regulation of actin filament-based process | biological_process |
| GO:0051258 | protein polymerization | biological_process |
| GO:0030832 | regulation of actin filament length | biological_process |
| GO:0030833 | regulation of actin filament polymerization | biological_process |
| GO:0030041 | actin filament polymerization | biological_process |
| GO:0110053 | regulation of actin filament organization | biological_process |
| GO:0008064 | regulation of actin polymerization or depolymerization | biological_process |
| GO:0032535 | regulation of cellular component size | biological_process |
| GO:0032271 | regulation of protein polymerization | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU153898 | True | 742 | lncRNA | 0.46 | 2 | 12104670 | 12105523 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002372 | NA | coding | upstream | 104 | 12101806 ~ 12104566 (+) |
| AMCG00002370 | NA | coding | upstream | 16846 | 12081626 ~ 12087824 (+) |
| AMCG00002369 | pdp1 | coding | upstream | 23088 | 12079963 ~ 12081582 (+) |
| AMCG00002365 | NA | coding | upstream | 29288 | 12060756 ~ 12075382 (+) |
| AMCG00002366 | fam92a1,LOC103394454 | coding | upstream | 52957 | 12046802 ~ 12051713 (+) |
| AMCG00002371 | ptpn23,LOC106597002,LOC107591991 | coding | downstream | 666 | 12106189 ~ 12121777 (+) |
| AMCG00002378 | NA | coding | downstream | 98498 | 12204021 ~ 12211319 (+) |
| AMCG00002379 | NA | coding | downstream | 121326 | 12226849 ~ 12241355 (+) |
| AMCG00002381 | NA | coding | downstream | 136763 | 12242286 ~ 12243888 (+) |
| AMCG00002380 | NA | coding | downstream | 139200 | 12244723 ~ 12246989 (+) |
| G122592 | NA | non-coding | upstream | 247344 | 11856478 ~ 11857326 (+) |
| G122549 | NA | non-coding | upstream | 387969 | 11716355 ~ 11716701 (+) |
| G122501 | NA | non-coding | upstream | 418352 | 11685432 ~ 11686318 (+) |
| G122478 | NA | non-coding | upstream | 561049 | 11543104 ~ 11543621 (+) |
| G122471 | NA | non-coding | upstream | 571210 | 11530886 ~ 11533460 (+) |
| G122743 | NA | non-coding | downstream | 22857 | 12128380 ~ 12129678 (+) |
| G122744 | NA | non-coding | downstream | 24355 | 12129878 ~ 12130747 (+) |
| G122829 | NA | non-coding | downstream | 267278 | 12372801 ~ 12373031 (+) |
| G122830 | NA | non-coding | downstream | 299419 | 12404942 ~ 12411141 (+) |
| G122868 | NA | non-coding | downstream | 946502 | 13052025 ~ 13052390 (+) |
| AMCG00002360 | NA | other | upstream | 88586 | 12011971 ~ 12016084 (+) |
| AMCG00002355 | NA | other | upstream | 205969 | 11894473 ~ 11898701 (+) |
| G122582 | NA | other | upstream | 268501 | 11835439 ~ 11836169 (+) |
| AMCG00002339 | NA | other | upstream | 389298 | 11710450 ~ 11715372 (+) |
| AMCG00002331 | NA | other | upstream | 410505 | 11688600 ~ 11694165 (+) |
| G122746 | NA | other | downstream | 28263 | 12133786 ~ 12140465 (+) |
| AMCG00002390 | NA | other | downstream | 926236 | 13031759 ~ 13051971 (+) |
| AMCG00002388 | NA | other | downstream | 939170 | 13044693 ~ 13070832 (+) |
| AMCG00002393 | NA | other | downstream | 1019855 | 13125378 ~ 13129697 (+) |
| AMCG00002437 | pcbp3,LOC108266078,LOC107657516,LOC107728912 | other | downstream | 2222109 | 14327632 ~ 14361536 (+) |
