G122743


Basic Information

Item Value
gene id G122743
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 12128380 ~ 12129678 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU153905
ATACCATGTTGTGCCCGCGCAGCAACAGCGGCGAGATCTCGCTGACGGGCGGGGAGTAGCCGTAGTCGTCGCAGGGCAAGTCTccgcggcggcggcggccgaCTGAAACTCCGTTCTGGCCGTAGTTCCTGGGGCAGAGGACCCGGTACAgacagaacagcagcagcaccagcagcaccCCGGCAGCCAGGCCCAGGGCCgccaccctgagagagagagagaggaagagaggagaagAGGGGTTCAGGCAGAGACAGGACGAGGCAGGGGCTCCCCCTTGCAAGCTttagtgttttttccccacagacaGTGTAGGGCTTTGTttcatgaatgaatgtatgtgttaatttacttatttaaaaaaaattaccagAAAAACATGTAACCCTGATCCTGACCGAGGCCTGGCAGGCACTGTATGAGGAGACTGATAACACACCCCTAAGATGTCCCTGGGCCCGCCCACCTACTATGACATCACTGAGCAGCTCATCTTACGAGAAGCGGAGTATCCAATGAGCTCTCGGGAGGCGGAGCTGGAGGGGTTGTAAATATTTGCCAATAGTACGGGTGCAACCTTTAAAGCGGACAGATCGAGAGAAGGCAAGATAAGAACTCCCCTGTGATAATGACTGAAAGGCGTCCAGACCCAAGACACTTTATCTTCCAGGAAGGAAAATGACATCATTGCTAAAGCGCTGCAGGGCAGGTTAGACTGCATGCTTTGTGGTGGGACTCTTGAACAGACAAGAGCAGCCTGGGAGACCGCAGACTCATCCAGCAGGTTTGGGGACTCTAAACACAGACGCCTCCCTCCTGTCCCCCGCTGTCACGAACACCCAGAGACGGAGAGAGCCTCTCCCGTCACTGCTGGAGAAGGGGCCCGCGTGTGGATTGTGTTAATCAGCTGTGTGGCAGAGACGCTACGCCTCCCTCCGCTATCAGTGCGCTTATCTCTAGTGAGACCTGCTAGTAGAGCAGAGTTCAGCTTTAAATGCAGGCAGTTGTGAAAGCACTGACACCGTGCCCTGGAGCACAGATGGGTACGGAGGTCAGGGGTGAGAGCAGCAGAGAGGAGACACTGACTTGTACAGCGTGAGGTCGGCCTGAGCAGGAACGGGCGGGGGGCCAGGGGAGCCAGCCAAGGGGGTCTGGGGGAGCCGTGTGTCCTGGGGATGCCGTGTCTCCAGGGCCTCCTGGGCGCTCAGGTACAGAGACACTGGGATCACTGGCAGGATACTGATGTACCTGGAACACACAGCACGTGAATGAATCCACAGGGATGCTGTACAatccaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153905 True 1299 lncRNA 0.56 1 12128380 12129678

Neighbor

gene id symbol gene type direction distance location
AMCG00002371 ptpn23,LOC106597002,LOC107591991 coding upstream 6603 12106189 ~ 12121777 (+)
AMCG00002372 NA coding upstream 23814 12101806 ~ 12104566 (+)
AMCG00002370 NA coding upstream 40556 12081626 ~ 12087824 (+)
AMCG00002369 pdp1 coding upstream 46798 12079963 ~ 12081582 (+)
AMCG00002365 NA coding upstream 52998 12060756 ~ 12075382 (+)
AMCG00002378 NA coding downstream 74343 12204021 ~ 12211319 (+)
AMCG00002379 NA coding downstream 97171 12226849 ~ 12241355 (+)
AMCG00002381 NA coding downstream 112608 12242286 ~ 12243888 (+)
AMCG00002380 NA coding downstream 115045 12244723 ~ 12246989 (+)
AMCG00002386 NA coding downstream 508808 12638486 ~ 12696128 (+)
G122737 NA non-coding upstream 22857 12104670 ~ 12105523 (+)
G122592 NA non-coding upstream 271054 11856478 ~ 11857326 (+)
G122549 NA non-coding upstream 411679 11716355 ~ 11716701 (+)
G122501 NA non-coding upstream 442062 11685432 ~ 11686318 (+)
G122478 NA non-coding upstream 584759 11543104 ~ 11543621 (+)
G122744 NA non-coding downstream 200 12129878 ~ 12130747 (+)
G122829 NA non-coding downstream 243123 12372801 ~ 12373031 (+)
G122830 NA non-coding downstream 275264 12404942 ~ 12411141 (+)
G122868 NA non-coding downstream 922347 13052025 ~ 13052390 (+)
G122876 NA non-coding downstream 937587 13067265 ~ 13067635 (+)
AMCG00002360 NA other upstream 112296 12011971 ~ 12016084 (+)
AMCG00002355 NA other upstream 229679 11894473 ~ 11898701 (+)
G122582 NA other upstream 292211 11835439 ~ 11836169 (+)
AMCG00002339 NA other upstream 413008 11710450 ~ 11715372 (+)
AMCG00002331 NA other upstream 434215 11688600 ~ 11694165 (+)
G122746 NA other downstream 4108 12133786 ~ 12140465 (+)
AMCG00002390 NA other downstream 902081 13031759 ~ 13051971 (+)
AMCG00002388 NA other downstream 915015 13044693 ~ 13070832 (+)
AMCG00002393 NA other downstream 995700 13125378 ~ 13129697 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 2197954 14327632 ~ 14361536 (+)

Expression


Co-expression Network