G122744


Basic Information

Item Value
gene id G122744
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 12129878 ~ 12130747 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU153906
CTCTTGGCTAGAGTAATGTTGTAGTAGCTGAACAGAGAGGGCCAGTGGCGGAAAGACAGGCGTCTCCAGGTCTCCTCGTCCTCGGGGCCCCAGCTGATCTGGGGACCGGGAGGGCTGTGGCTGGGGAGACCGTGGCCCTGGGAGTGGTTCTCCGGCAGTGGCACGGGTTCGGGAGGGGGCAGGACATTCAGGGGGCTGGTGGGGTCGCCTCCGGGGAAGACCGGGGGCACGCCCAGGGGGGGCAGGCCAGCCTCACCCAGGGGGCTCTGCTCCGACACCTGAGCGGCCAGGTAGGTGCGCAGCCCCGCGGGGTCGGTGTACACCAGGATGCCGATCCAGATCACGGTGCCGGCCTGCCAGACACACAGAGGCCACCATCACACAACAGGCAAAACCGGCCATGGCAGAACTTAGACTCAAACACCGGGAATCTCTGAGTTACTGAAACTCACCATGATGATGCGCTGAGCCAGGCGTGTCCGTGCCAGGAAGTAGACGACGCGCAGCCGCTTGGGCAGCCGCAGGGAGCGCAGGGCGGGCTGCAGGGTGATGGTGTGGGGTGTGGAGGGCCGGAGTGGGGGTGGGCGCTCGCTGCGGGGAGGGGCGGGGCTGTCCCGTGGGCGCAGGGGGGCGGGCTTCGGGGGGGGCAGACCAGCCTCTGCGGGCAATCGCCGATTCAGATCAGCgagctgaggagagagagagggaggcggTGTTTCCGAGGTTGACGTGAACATGGACCTGACCTGGAGCGCCTGGCTTAATGGCTCACCTCCATGCGGCGGATGTCGATGGAGAGGACAGTGGTGAAGAAGAACATCTGCAGGAAGAAGTCCGAGACCAGGCCCACCACGGCAAACAGACAGAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153906 True 870 lncRNA 0.66 1 12129878 12130747

Neighbor

gene id symbol gene type direction distance location
AMCG00002371 ptpn23,LOC106597002,LOC107591991 coding upstream 8101 12106189 ~ 12121777 (+)
AMCG00002372 NA coding upstream 25312 12101806 ~ 12104566 (+)
AMCG00002370 NA coding upstream 42054 12081626 ~ 12087824 (+)
AMCG00002369 pdp1 coding upstream 48296 12079963 ~ 12081582 (+)
AMCG00002365 NA coding upstream 54496 12060756 ~ 12075382 (+)
AMCG00002378 NA coding downstream 73274 12204021 ~ 12211319 (+)
AMCG00002379 NA coding downstream 96102 12226849 ~ 12241355 (+)
AMCG00002381 NA coding downstream 111539 12242286 ~ 12243888 (+)
AMCG00002380 NA coding downstream 113976 12244723 ~ 12246989 (+)
AMCG00002386 NA coding downstream 507739 12638486 ~ 12696128 (+)
G122743 NA non-coding upstream 200 12128380 ~ 12129678 (+)
G122737 NA non-coding upstream 24355 12104670 ~ 12105523 (+)
G122592 NA non-coding upstream 272552 11856478 ~ 11857326 (+)
G122549 NA non-coding upstream 413177 11716355 ~ 11716701 (+)
G122501 NA non-coding upstream 443560 11685432 ~ 11686318 (+)
G122829 NA non-coding downstream 242054 12372801 ~ 12373031 (+)
G122830 NA non-coding downstream 274195 12404942 ~ 12411141 (+)
G122868 NA non-coding downstream 921278 13052025 ~ 13052390 (+)
G122876 NA non-coding downstream 936518 13067265 ~ 13067635 (+)
G122911 NA non-coding downstream 1057202 13187949 ~ 13188278 (+)
AMCG00002360 NA other upstream 113794 12011971 ~ 12016084 (+)
AMCG00002355 NA other upstream 231177 11894473 ~ 11898701 (+)
G122582 NA other upstream 293709 11835439 ~ 11836169 (+)
AMCG00002339 NA other upstream 414506 11710450 ~ 11715372 (+)
AMCG00002331 NA other upstream 435713 11688600 ~ 11694165 (+)
G122746 NA other downstream 3039 12133786 ~ 12140465 (+)
AMCG00002390 NA other downstream 901012 13031759 ~ 13051971 (+)
AMCG00002388 NA other downstream 913946 13044693 ~ 13070832 (+)
AMCG00002393 NA other downstream 994631 13125378 ~ 13129697 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 2196885 14327632 ~ 14361536 (+)

Expression


Co-expression Network