G122830


Basic Information

Item Value
gene id G122830
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 12404942 ~ 12411141 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154010
ttcactgtactaaactggcccccacagtcaccagatctcaacccaataaagcatttttgggaaggtggtggaacgggagcttcgtgccctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcaccttgttgaatcaatgccacgtagaattaaggcagttctgaaggcaaaagggggtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtatatatatatatatatatat

Function

NR:

description
PREDICTED: rho guanine nucleotide exchange factor 1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154010 True 297 lncRNA 0.41 2 12404942 12411141

Neighbor

gene id symbol gene type direction distance location
AMCG00002380 NA coding upstream 157953 12244723 ~ 12246989 (+)
AMCG00002381 NA coding upstream 161054 12242286 ~ 12243888 (+)
AMCG00002379 NA coding upstream 163587 12226849 ~ 12241355 (+)
AMCG00002378 NA coding upstream 193623 12204021 ~ 12211319 (+)
AMCG00002371 ptpn23,LOC106597002,LOC107591991 coding upstream 283165 12106189 ~ 12121777 (+)
AMCG00002386 NA coding downstream 227345 12638486 ~ 12696128 (+)
AMCG00002391 NA coding downstream 610426 13021567 ~ 13024109 (+)
AMCG00002387 cyhr1,LOC107591623,LOC107742848,LOC107696565,LOC107706189 coding downstream 660285 13071426 ~ 13085078 (+)
AMCG00002394 NA coding downstream 678275 13089416 ~ 13090383 (+)
AMCG00002400 NA coding downstream 729526 13140667 ~ 13141587 (+)
G122829 NA non-coding upstream 31911 12372801 ~ 12373031 (+)
G122744 NA non-coding upstream 274195 12129878 ~ 12130747 (+)
G122743 NA non-coding upstream 275264 12128380 ~ 12129678 (+)
G122737 NA non-coding upstream 299419 12104670 ~ 12105523 (+)
G122592 NA non-coding upstream 547616 11856478 ~ 11857326 (+)
G122868 NA non-coding downstream 640884 13052025 ~ 13052390 (+)
G122876 NA non-coding downstream 656124 13067265 ~ 13067635 (+)
G122911 NA non-coding downstream 776808 13187949 ~ 13188278 (+)
G122914 NA non-coding downstream 778141 13189282 ~ 13189862 (+)
G122929 NA non-coding downstream 893556 13304697 ~ 13305599 (+)
G122746 NA other upstream 264477 12133786 ~ 12140465 (+)
AMCG00002360 NA other upstream 388858 12011971 ~ 12016084 (+)
AMCG00002355 NA other upstream 506241 11894473 ~ 11898701 (+)
G122582 NA other upstream 568773 11835439 ~ 11836169 (+)
AMCG00002339 NA other upstream 689570 11710450 ~ 11715372 (+)
AMCG00002390 NA other downstream 620618 13031759 ~ 13051971 (+)
AMCG00002388 NA other downstream 633552 13044693 ~ 13070832 (+)
AMCG00002393 NA other downstream 714237 13125378 ~ 13129697 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 1916491 14327632 ~ 14361536 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 4547020 16958161 ~ 16960082 (+)

Expression


Co-expression Network