G122868


Basic Information

Item Value
gene id G122868
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13052025 ~ 13052390 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154055
CAGCAAGTGTTTCATCAGAGCCCACCACCTTAGCTGACCCTTCAACCTGTCTGGCGGAAGGCAGAGGTAGAAGACGGTGGTTCTCCTCATCTCAGTTTTTCGTGGGCTGCAGCGTAAACCGATGACGCAGACGTCTgcgtgtgtatatttatatattcaactTGAGGAAGCCTGCATGGCTGGAATCTGGTGCTGCTTTTGAAAGTGCTGAGCTGAGTGACTGCAGCCTGTGGGTGTGAGATGGTGTCAAACTCCCCCAGCACACGCTCTGTCCCCCCCATCCCCCGGACCCTCACATGCCACAGCCAGCATAGCGCTGCAGTCTCTCTGAACTGTGTCTGTCATGTTGTAGTTGTTTGTGTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154055 True 366 lncRNA 0.53 1 13052025 13052390

Neighbor

gene id symbol gene type direction distance location
AMCG00002391 NA coding upstream 27916 13021567 ~ 13024109 (+)
AMCG00002386 NA coding upstream 355897 12638486 ~ 12696128 (+)
AMCG00002380 NA coding upstream 805036 12244723 ~ 12246989 (+)
AMCG00002381 NA coding upstream 808137 12242286 ~ 12243888 (+)
AMCG00002379 NA coding upstream 810670 12226849 ~ 12241355 (+)
AMCG00002387 cyhr1,LOC107591623,LOC107742848,LOC107696565,LOC107706189 coding downstream 19036 13071426 ~ 13085078 (+)
AMCG00002394 NA coding downstream 37026 13089416 ~ 13090383 (+)
AMCG00002400 NA coding downstream 88277 13140667 ~ 13141587 (+)
AMCG00002401 NA coding downstream 138639 13191029 ~ 13194076 (+)
AMCG00002402 NA coding downstream 176137 13228527 ~ 13237405 (+)
G122830 NA non-coding upstream 640884 12404942 ~ 12411141 (+)
G122829 NA non-coding upstream 678994 12372801 ~ 12373031 (+)
G122744 NA non-coding upstream 921278 12129878 ~ 12130747 (+)
G122743 NA non-coding upstream 922347 12128380 ~ 12129678 (+)
G122737 NA non-coding upstream 946502 12104670 ~ 12105523 (+)
G122876 NA non-coding downstream 14875 13067265 ~ 13067635 (+)
G122911 NA non-coding downstream 135559 13187949 ~ 13188278 (+)
G122914 NA non-coding downstream 136892 13189282 ~ 13189862 (+)
G122929 NA non-coding downstream 252307 13304697 ~ 13305599 (+)
G123039 NA non-coding downstream 493674 13546064 ~ 13546300 (+)
AMCG00002390 NA other upstream 54 13031759 ~ 13051971 (+)
G122746 NA other upstream 911560 12133786 ~ 12140465 (+)
AMCG00002360 NA other upstream 1035941 12011971 ~ 12016084 (+)
AMCG00002355 NA other upstream 1153324 11894473 ~ 11898701 (+)
G122582 NA other upstream 1215856 11835439 ~ 11836169 (+)
AMCG00002393 NA other downstream 72988 13125378 ~ 13129697 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 1275242 14327632 ~ 14361536 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 3905771 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 3923898 16976288 ~ 16985906 (+)
G123807 NA other downstream 4863046 17915436 ~ 17984730 (+)

Expression


Co-expression Network