G122876


Basic Information

Item Value
gene id G122876
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13067265 ~ 13067635 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154064
taaaaactctttgaagtggacgagagccgaaatcccgacatagagctacgaacccgggccaaccggcatttccaaaagatggcatggattgacatcagtcataaatcaagcccccctccaataggacactgggggctgaaaccgaaatccaatctcaaaaactcaagaaccaatcacctattgatctgacagactataaagaacagcgcacagtctctttctctctctctctcacctgaaccagaaacttgctgccacagctcaacctgtagctctgttgcccgaaccggaaccagaaaccaactaagtctttgccggcaacagaagagttaaacagggaaaaggagattgagccgtacgaagaattcttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154064 True 371 lncRNA 0.47 1 13067265 13067635

Neighbor

gene id symbol gene type direction distance location
AMCG00002391 NA coding upstream 43156 13021567 ~ 13024109 (+)
AMCG00002386 NA coding upstream 371137 12638486 ~ 12696128 (+)
AMCG00002380 NA coding upstream 820276 12244723 ~ 12246989 (+)
AMCG00002381 NA coding upstream 823377 12242286 ~ 12243888 (+)
AMCG00002379 NA coding upstream 825910 12226849 ~ 12241355 (+)
AMCG00002387 cyhr1,LOC107591623,LOC107742848,LOC107696565,LOC107706189 coding downstream 3791 13071426 ~ 13085078 (+)
AMCG00002394 NA coding downstream 21781 13089416 ~ 13090383 (+)
AMCG00002400 NA coding downstream 73032 13140667 ~ 13141587 (+)
AMCG00002401 NA coding downstream 123394 13191029 ~ 13194076 (+)
AMCG00002402 NA coding downstream 160892 13228527 ~ 13237405 (+)
G122868 NA non-coding upstream 14875 13052025 ~ 13052390 (+)
G122830 NA non-coding upstream 656124 12404942 ~ 12411141 (+)
G122829 NA non-coding upstream 694234 12372801 ~ 12373031 (+)
G122744 NA non-coding upstream 936518 12129878 ~ 12130747 (+)
G122743 NA non-coding upstream 937587 12128380 ~ 12129678 (+)
G122911 NA non-coding downstream 120314 13187949 ~ 13188278 (+)
G122914 NA non-coding downstream 121647 13189282 ~ 13189862 (+)
G122929 NA non-coding downstream 237062 13304697 ~ 13305599 (+)
G123039 NA non-coding downstream 478429 13546064 ~ 13546300 (+)
G123041 NA non-coding downstream 498779 13566414 ~ 13570811 (+)
AMCG00002390 NA other upstream 15294 13031759 ~ 13051971 (+)
G122746 NA other upstream 926800 12133786 ~ 12140465 (+)
AMCG00002360 NA other upstream 1051181 12011971 ~ 12016084 (+)
AMCG00002355 NA other upstream 1168564 11894473 ~ 11898701 (+)
G122582 NA other upstream 1231096 11835439 ~ 11836169 (+)
AMCG00002393 NA other downstream 57743 13125378 ~ 13129697 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 1259997 14327632 ~ 14361536 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 3890526 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 3908653 16976288 ~ 16985906 (+)
G123807 NA other downstream 4847801 17915436 ~ 17984730 (+)

Expression


Co-expression Network