Gene
RNA
| Item | Value |
|---|---|
| gene id | G122877 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 13067221 ~ 13067627 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU154065 | True | 407 | lncRNA | 0.48 | 1 | 13067221 | 13067627 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002392 | NA | coding | downstream | 22858 | 13032629 ~ 13044363 (-) |
| AMCG00002389 | NA | coding | downstream | 69799 | 12982829 ~ 12997422 (-) |
| AMCG00002385 | tsnare1,si:ch211-208k15.1,LOC106605505,LOC107679652 | coding | downstream | 563195 | 12483894 ~ 12504026 (-) |
| AMCG00002383 | NA | coding | downstream | 806815 | 12251292 ~ 12260406 (-) |
| AMCG00002384 | NA | coding | downstream | 818275 | 12248147 ~ 12248946 (-) |
| AMCG00002398 | NA | coding | upstream | 26437 | 13094064 ~ 13102528 (-) |
| AMCG00002395 | NA | coding | upstream | 50853 | 13118480 ~ 13121283 (-) |
| AMCG00002399 | NA | coding | upstream | 83962 | 13151589 ~ 13152326 (-) |
| AMCG00002396 | NA | coding | upstream | 84741 | 13152368 ~ 13179775 (-) |
| AMCG00002397 | NA | coding | upstream | 115094 | 13182721 ~ 13186037 (-) |
| G122869 | NA | non-coding | downstream | 14831 | 13052026 ~ 13052390 (-) |
| G122858 | NA | non-coding | downstream | 61886 | 13000841 ~ 13005335 (-) |
| G122801 | NA | non-coding | downstream | 823307 | 12195920 ~ 12243914 (-) |
| G122726 | NA | non-coding | downstream | 1022202 | 12043315 ~ 12045019 (-) |
| G122621 | NA | non-coding | downstream | 1203165 | 11862903 ~ 11864056 (-) |
| G122879 | NA | non-coding | upstream | 1207 | 13068834 ~ 13069238 (-) |
| G122897 | NA | non-coding | upstream | 74241 | 13141868 ~ 13147672 (-) |
| G122942 | NA | non-coding | upstream | 217710 | 13285337 ~ 13286312 (-) |
| G122945 | NA | non-coding | upstream | 221414 | 13289041 ~ 13289249 (-) |
| G122946 | NA | non-coding | upstream | 221681 | 13289308 ~ 13289916 (-) |
| G122862 | NA | other | downstream | 37815 | 13028197 ~ 13029406 (-) |
| AMCG00002368 | rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 | other | downstream | 1060869 | 11995828 ~ 12006352 (-) |
| AMCG00002351 | NA | other | downstream | 1194359 | 11869607 ~ 11872862 (-) |
| AMCG00002350 | tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 | other | downstream | 1212330 | 11848470 ~ 11854891 (-) |
| G122597 | NA | other | downstream | 1332897 | 11731617 ~ 11734324 (-) |
| AMCG00002421 | sec61b,LOC102796100 | other | upstream | 581600 | 13649227 ~ 13654247 (-) |
| G123263 | NA | other | upstream | 1873633 | 14941260 ~ 14946311 (-) |
| G123585 | NA | other | upstream | 3768529 | 16836156 ~ 16839722 (-) |
| AMCG00002503 | NA | other | upstream | 3890535 | 16958162 ~ 16974301 (-) |
| AMCG00002524 | NA | other | upstream | 4622381 | 17690008 ~ 17706289 (-) |
