G122911


Basic Information

Item Value
gene id G122911
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13187949 ~ 13188278 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154105
TCACTGGCACAGTCTTTATTGGATTTTAACAGTGTACTGCACAAATGCAAGCCCCACTGCATTAGCTGGCACACTTCTGCAGAGCTGCTCCTGAGGAACAGGGACCTGGGGAGAGCAGGGGTGGAGAAAGACGGAGATAAGTTAGTCTGGTCACAGGCATACCATCCCAGAGAACACCAACTTTTTGGGCAATTCTGTATACAGAGTGTGTAGCACTGAGCCAAATTACTCACAGAAAACCATAACCTAAGCAGAGCAATCTAAACAACGAACCCACAGACCTCACAGCCCAAACGACCCTTAGACAGGAACACAGTCGCTCTCACGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154105 True 330 lncRNA 0.49 1 13187949 13188278

Neighbor

gene id symbol gene type direction distance location
AMCG00002400 NA coding upstream 46362 13140667 ~ 13141587 (+)
AMCG00002394 NA coding upstream 97566 13089416 ~ 13090383 (+)
AMCG00002387 cyhr1,LOC107591623,LOC107742848,LOC107696565,LOC107706189 coding upstream 102871 13071426 ~ 13085078 (+)
AMCG00002391 NA coding upstream 163840 13021567 ~ 13024109 (+)
AMCG00002386 NA coding upstream 491821 12638486 ~ 12696128 (+)
AMCG00002401 NA coding downstream 2751 13191029 ~ 13194076 (+)
AMCG00002402 NA coding downstream 40249 13228527 ~ 13237405 (+)
AMCG00002408 NA coding downstream 83403 13271681 ~ 13304556 (+)
AMCG00002409 NA coding downstream 119719 13307997 ~ 13328399 (+)
AMCG00002406 NA coding downstream 181033 13369311 ~ 13373738 (+)
G122876 NA non-coding upstream 120314 13067265 ~ 13067635 (+)
G122868 NA non-coding upstream 135559 13052025 ~ 13052390 (+)
G122830 NA non-coding upstream 776808 12404942 ~ 12411141 (+)
G122829 NA non-coding upstream 814918 12372801 ~ 12373031 (+)
G122744 NA non-coding upstream 1057202 12129878 ~ 12130747 (+)
G122914 NA non-coding downstream 1004 13189282 ~ 13189862 (+)
G122929 NA non-coding downstream 116419 13304697 ~ 13305599 (+)
G123039 NA non-coding downstream 357786 13546064 ~ 13546300 (+)
G123041 NA non-coding downstream 378136 13566414 ~ 13570811 (+)
G123043 NA non-coding downstream 384241 13572519 ~ 13590681 (+)
AMCG00002393 NA other upstream 58252 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 117117 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 135978 13031759 ~ 13051971 (+)
G122746 NA other upstream 1047484 12133786 ~ 12140465 (+)
AMCG00002360 NA other upstream 1171865 12011971 ~ 12016084 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 1139354 14327632 ~ 14361536 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 3769883 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 3788010 16976288 ~ 16985906 (+)
G123807 NA other downstream 4727158 17915436 ~ 17984730 (+)
G123989 NA other downstream 5643736 18832014 ~ 18838531 (+)

Expression


Co-expression Network