G122955


Basic Information

Item Value
gene id G122955
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13299523 ~ 13300118 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154156
CGATGTGTCGGCAGATGCGTCCGACCAGTTTGCCCTTGTTGAGCGCAGTGACCCGCAGGCTGCAGTCCCAATGCCCCCCGCTGAACAGCAGCCTCCCGTCACTGGACACCACCAGCACCCGTGGGCCCAGCTCCGCCCCTGGGGACAGGGGGCCACACACCATCCGCTGGGTCCTgcagcaggagaaagaagggagagagaggggatgtgTGAGAGGGTGGATGCAGGGTGTGCGGAATGATTGAGAAATGGCAATGGGGGGAGTCTACTGTGacaggaggagggagagagaggcgcAGTGCAGGCGGGGTGGAGGGGGTCGTTGGTCTGCGGTCTCACTTGGGGTTGGAGATGGTAGGGTCCTTGGTGAAGGTGAAGTAGTTGGCGATGTTCTTGTCGTATGGCAGCCAGCTGTGTGTGCCCAGAAGGCCATTGGCACTGACTGTcacctgggggagagagggCAGGGGCACTTTATATTATTAGCTCATTGGGGTATCAGTGTGGAAAAgtgtatataagtgtgtgtgagactcACCAGCAGGTCTGATCCCTGTGTGATGAAGGAGCGCGTCTGGTTTCGGGGAACCACAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154156 True 596 lncRNA 0.59 1 13299523 13300118

Neighbor

gene id symbol gene type direction distance location
AMCG00002405 ccdc12,LOC102782761 coding downstream 49672 13238743 ~ 13249851 (-)
AMCG00002404 NA coding downstream 72379 13219608 ~ 13227144 (-)
AMCG00002403 nacad,LOC107579097 coding downstream 85720 13196825 ~ 13213803 (-)
AMCG00002397 NA coding downstream 113486 13182721 ~ 13186037 (-)
AMCG00002396 NA coding downstream 119748 13152368 ~ 13179775 (-)
AMCG00002410 setd2,LOC106606040,LOC107596709 coding upstream 32877 13332995 ~ 13369397 (-)
AMCG00002411 NA coding upstream 77049 13377167 ~ 13384055 (-)
AMCG00002415 NA coding upstream 106234 13406352 ~ 13411130 (-)
AMCG00002416 NA coding upstream 114182 13414300 ~ 13430384 (-)
AMCG00002417 LOC106605926,LOC106594359 coding upstream 158365 13458483 ~ 13478876 (-)
G122954 NA non-coding downstream 849 13297432 ~ 13298674 (-)
G122953 NA non-coding downstream 2169 13296904 ~ 13297354 (-)
G122951 NA non-coding downstream 4489 13294821 ~ 13295034 (-)
G122950 NA non-coding downstream 5374 13293750 ~ 13294149 (-)
G122949 NA non-coding downstream 5778 13292850 ~ 13293745 (-)
G122956 NA non-coding upstream 2002 13302120 ~ 13303082 (-)
G122957 NA non-coding upstream 3034 13303152 ~ 13305595 (-)
G122991 NA non-coding upstream 111381 13411499 ~ 13412296 (-)
G123014 NA non-coding upstream 154967 13455085 ~ 13457059 (-)
G123027 NA non-coding upstream 186996 13487114 ~ 13491617 (-)
G122862 NA other downstream 270117 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 1293171 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 1426661 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 1444632 11848470 ~ 11854891 (-)
G122597 NA other downstream 1565199 11731617 ~ 11734324 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 349109 13649227 ~ 13654247 (-)
G123263 NA other upstream 1641142 14941260 ~ 14946311 (-)
G123585 NA other upstream 3536038 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 3658044 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 4389890 17690008 ~ 17706289 (-)

Expression


Co-expression Network