G122991


Basic Information

Item Value
gene id G122991
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13411499 ~ 13412296 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154199
CTGCGGGCGCTACGGAGGCACCAGCACTCGCATGCCGGCGGGGACATGTACAGCTGCAGTGAGTGTGGGAAGACATACCGAGACCTGCGCGGGCTCAAGCGGCACCAGAAGCTGCACCCGGGCCGGAAGCCCTATGCCCTGGTGAACAAGATCAAGGGCTACTGATTTGCTGGCTGGGGGTGAGGACAGTATAAATCTAATCAGTGAATCAGTGATCCAAGTAGGGGAGGGCTGTTTCATCTGCACTGTGATAGTCCAATCTGCAGTGGCAGGTGTGGCACTCAGGCAGCACAGCAGGGAGCACTGAGGACATTAGCTAATATCTCACAGCTGCTCCTCACACCAAGCTGCTGCCACTGTCCAGACCATTGTGCCCCCATGGGGAGAGCCACCTCAGGGCCAACACTGTGAGGGTGAGCTGGGACTTAAGGATGGAAAGGTGTTACCCGCCATGCCTGAACTGCCAGGGCCAGATGTGCTGGTCCTGTACTGCAGTCAGAGAGGTgacttattaaatattacagtaaGTGAGCACCACCACTGCTGTCAGGATGTTGAGTGCTACTGGCCTGTGCTTGAGCTGAGCAGCGTTTCCTCCTGTGTGCTGTCTGTTCACGGGTATGTCCATGAGTTGGGTATAAGACAAACagacaagaaacaaatataaaaaacgATGAATTTATCACAGAATATCCCACATTCAAATGATGACAATGCAGTATATCAGTTTGCACACTTTCTTCAATGTGTTCCAGTTAAGAACATGTAAAAATTGTTTCTGCAATAAAGGATTGGGTT

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU154199 True 798 lncRNA 0.51 1 13411499 13412296

Neighbor

gene id symbol gene type direction distance location
AMCG00002415 NA coding downstream 369 13406352 ~ 13411130 (-)
AMCG00002411 NA coding downstream 27444 13377167 ~ 13384055 (-)
AMCG00002410 setd2,LOC106606040,LOC107596709 coding downstream 42102 13332995 ~ 13369397 (-)
AMCG00002405 ccdc12,LOC102782761 coding downstream 161648 13238743 ~ 13249851 (-)
AMCG00002404 NA coding downstream 184355 13219608 ~ 13227144 (-)
AMCG00002416 NA coding upstream 2004 13414300 ~ 13430384 (-)
AMCG00002417 LOC106605926,LOC106594359 coding upstream 46187 13458483 ~ 13478876 (-)
AMCG00002419 NA coding upstream 102028 13514324 ~ 13531753 (-)
AMCG00002420 NA coding upstream 125186 13537482 ~ 13570758 (-)
AMCG00002425 glipr2 coding upstream 259053 13671349 ~ 13678716 (-)
G122957 NA non-coding downstream 105904 13303152 ~ 13305595 (-)
G122956 NA non-coding downstream 108417 13302120 ~ 13303082 (-)
G122955 NA non-coding downstream 111381 13299523 ~ 13300118 (-)
G122954 NA non-coding downstream 112825 13297432 ~ 13298674 (-)
G122953 NA non-coding downstream 114145 13296904 ~ 13297354 (-)
G123014 NA non-coding upstream 42789 13455085 ~ 13457059 (-)
G123027 NA non-coding upstream 74818 13487114 ~ 13491617 (-)
G123152 NA non-coding upstream 665948 14078244 ~ 14111201 (-)
G123175 NA non-coding upstream 1130525 14542821 ~ 14543020 (-)
G123177 NA non-coding upstream 1153951 14566247 ~ 14567067 (-)
G122862 NA other downstream 382093 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 1405147 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 1538637 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 1556608 11848470 ~ 11854891 (-)
G122597 NA other downstream 1677175 11731617 ~ 11734324 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 236931 13649227 ~ 13654247 (-)
G123263 NA other upstream 1528964 14941260 ~ 14946311 (-)
G123585 NA other upstream 3423860 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 3545866 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 4277712 17690008 ~ 17706289 (-)

Expression


Co-expression Network