G123039


Basic Information

Item Value
gene id G123039
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13546064 ~ 13546300 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154271
CTGTGCGCGAGCCGCAGCACAAAGAGCTGCAGGAAGGCGGAGTCGATCAGGAGGTTCTGGTCGTCGCGGTGCAGCTCGGGGAAGCCGGGCAGGCGCTCTGCCCATGCGCGGGTCACCTCCATTGAGCTGGTCAGCAGCCGGTAGAACTGCTGGATGTGCTGTGCGTCCGAGGAGGCGGCCGCCGGCTGGTCAGTGGCACTGAACTGGGGAGAGCCACAGAGAGAGCAGAGTCAGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154271 True 237 lncRNA 0.66 1 13546064 13546300

Neighbor

gene id symbol gene type direction distance location
AMCG00002418 erp44,LOC107593692,LOC107723539 coding upstream 34781 13490178 ~ 13511283 (+)
AMCG00002413 NA coding upstream 90566 13440937 ~ 13455498 (+)
AMCG00002414 NA coding upstream 106870 13430836 ~ 13439194 (+)
AMCG00002412 NA coding upstream 140001 13389185 ~ 13406063 (+)
AMCG00002407 NA coding upstream 169776 13375580 ~ 13376288 (+)
AMCG00002422 NA coding downstream 108939 13655239 ~ 13656558 (+)
AMCG00002423 frrs1l coding downstream 144720 13691020 ~ 13696602 (+)
AMCG00002424 tmem245,LOC103353896 coding downstream 153950 13700250 ~ 13718461 (+)
AMCG00002429 ino80c,LOC107706244 coding downstream 320814 13867114 ~ 13877797 (+)
AMCG00002440 NA coding downstream 852887 14399187 ~ 14459606 (+)
G122929 NA non-coding upstream 240465 13304697 ~ 13305599 (+)
G122914 NA non-coding upstream 356202 13189282 ~ 13189862 (+)
G122911 NA non-coding upstream 357786 13187949 ~ 13188278 (+)
G122876 NA non-coding upstream 478429 13067265 ~ 13067635 (+)
G122868 NA non-coding upstream 493674 13052025 ~ 13052390 (+)
G123041 NA non-coding downstream 20114 13566414 ~ 13570811 (+)
G123043 NA non-coding downstream 26219 13572519 ~ 13590681 (+)
G123169 NA non-coding downstream 818736 14365036 ~ 14366335 (+)
G123171 NA non-coding downstream 822793 14369093 ~ 14369913 (+)
G123197 NA non-coding downstream 1145681 14691981 ~ 14692776 (+)
AMCG00002393 NA other upstream 416367 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 475232 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 494093 13031759 ~ 13051971 (+)
G122746 NA other upstream 1405599 12133786 ~ 12140465 (+)
AMCG00002360 NA other upstream 1529980 12011971 ~ 12016084 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other downstream 781332 14327632 ~ 14361536 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 3411861 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 3429988 16976288 ~ 16985906 (+)
G123807 NA other downstream 4369136 17915436 ~ 17984730 (+)
G123989 NA other downstream 5285714 18832014 ~ 18838531 (+)

Expression


Co-expression Network