G123152


Basic Information

Item Value
gene id G123152
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 14078244 ~ 14111201 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154403
CCCCTTTTAGTTTCCACGGCATGGATTGGGGGAGGGGCGATCGGGACACATAGGGCATAGTGAAATAAGGCCAGGGAAATGAAAAGGGGCAGTGGCGCGCAccacccctgccccccacctcTGCCTGTGGCTGTATATCCAAGACCTCCTGTGCAGCTGTCCACCAGCACGTAACCTACACTCTTTTAAATTGGACCTTCTCCAAGTCCCCAGGACAAAGCATTGCACTTTAGGGGACTGGGCCTTCTCTGTAGTAGCACCTCATCTATGGAACTCACTCCCTGGCTATATCAAAGTCTGTAACACCcttgacattttttaatctaatcttataacacatttttatgaattggcctatgtaaaaaaaatattgttgatgtgttttgtatgtgttttattgtggttTATACTGTGAAGTGCCCTGAGATTCCTGTAATTAATTgcgct

Function

NR:

description
PREDICTED: alpha-N-acetylgalactosaminidase

GO:

id name namespace
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154403 True 447 lncRNA 0.46 2 14078244 14111201

Neighbor

gene id symbol gene type direction distance location
AMCG00002434 NA coding downstream 34340 13990906 ~ 14043904 (-)
AMCG00002433 NA coding downstream 111777 13966110 ~ 13966467 (-)
AMCG00002432 NA coding downstream 138983 13885177 ~ 13939261 (-)
AMCG00002430 galnt1,LOC107593713 coding downstream 285054 13788543 ~ 13793190 (-)
AMCG00002431 NA coding downstream 305935 13768415 ~ 13772309 (-)
AMCG00002435 NA coding upstream 16603 14127804 ~ 14151845 (-)
AMCG00002438 NA coding upstream 253854 14365055 ~ 14369820 (-)
AMCG00002445 fignl1 coding upstream 569183 14680384 ~ 14682429 (-)
AMCG00002448 NA coding upstream 585197 14696398 ~ 14731127 (-)
AMCG00002447 NA coding upstream 650636 14761837 ~ 14787948 (-)
G123027 NA non-coding downstream 586627 13487114 ~ 13491617 (-)
G123014 NA non-coding downstream 621185 13455085 ~ 13457059 (-)
G122991 NA non-coding downstream 665948 13411499 ~ 13412296 (-)
G122957 NA non-coding downstream 772649 13303152 ~ 13305595 (-)
G122956 NA non-coding downstream 775162 13302120 ~ 13303082 (-)
G123175 NA non-coding upstream 431620 14542821 ~ 14543020 (-)
G123177 NA non-coding upstream 455046 14566247 ~ 14567067 (-)
G123178 NA non-coding upstream 476013 14587214 ~ 14588758 (-)
G123179 NA non-coding upstream 477608 14588809 ~ 14594542 (-)
G123204 NA non-coding upstream 580769 14691970 ~ 14692999 (-)
AMCG00002421 sec61b,LOC102796100 other downstream 423997 13649227 ~ 13654247 (-)
G122862 NA other downstream 1048838 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 2071892 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 2205382 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 2223353 11848470 ~ 11854891 (-)
G123263 NA other upstream 830059 14941260 ~ 14946311 (-)
G123585 NA other upstream 2724955 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 2846961 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 3578807 17690008 ~ 17706289 (-)
G123829 NA other upstream 3811251 17922452 ~ 17989465 (-)

Expression


Co-expression Network