G123197



Basic Information


Item Value
gene id G123197
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 14691981 ~ 14692776 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU154466
aatcagcaggggatcaaatacttttttccctcactgtactacTCTGTATGTAATGCATAACTTACCAAAGTGATCTGCGTATCTTGTAGTCTGCACAGCTCTCCTTCTGCGTGGGATTATTTTGTGTTCTCAGGGTCAGGACTCAATGAGAGCCTTGTGCCAAGCGTGGTTCAAATATCATGACTTCACTGTCACTGAAAGTAATGTGTTCTCCAATGTGTATGTACTGCCTTGAAAAGcagagtgtttttgtttatttcaattgtCATCTGTgcctatttttatttgattgtggaTTTCTGTGGCACTGAAGAGAAGATGATATACTTCTGAAACATGGGGACTCATTGAGGAGAGACAGCTACGTAGAATTGTTATCATTGGCATCTCATTTCCTGATGGTGCAAATGGTCGAGgctgattgtattgtattgcattggtTCAGCTTGAAGGAGAAATTAGATAGAGAATGTAGTATTTGAGTGTATCTAACCTGTGCTTCTGATACGGAAACTACACTTGAACCCGATTCCTCTGAAACTGCTGTTGACCCAGAATAAAGCTCAAATAAAAAGgatgaaataaaaactgatggAAACACAGTGATGTATCTCTGTATAAGGGCAGAGGAATGGACTTGGACCAAGAAGACAAATCACAGAATGAAGCCATGAAGGAACTTGAATGAGCTTTTACTGTTATTAGGTGGTTTTTCATGTGTTAGTTTTTGTGGTTTGGTGAGTGTTTATCCCTGTCTGTCATGAAGATTAAATCCAAATAAACACCCACAATCACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU154466 True 796 lncRNA 0.39 1 14691981 14692776

Neighbor


gene id symbol gene type direction distance location
AMCG00002443 NA coding upstream 5011 14686068 ~ 14686970 (+)
AMCG00002441 ikzf1 coding upstream 25757 14655853 ~ 14666224 (+)
AMCG00002444 NA coding upstream 50031 14638876 ~ 14641950 (+)
AMCG00002442 NA coding upstream 77888 14605664 ~ 14614093 (+)
AMCG00002439 NA coding upstream 114997 14566399 ~ 14576984 (+)
AMCG00002451 NA coding downstream 185373 14878149 ~ 14911316 (+)
AMCG00002450 NA coding downstream 229646 14922422 ~ 14946523 (+)
AMCG00002449 NA coding downstream 258262 14951038 ~ 14962371 (+)
AMCG00002456 NA coding downstream 680230 15373006 ~ 15378676 (+)
AMCG00002457 NA coding downstream 696440 15389216 ~ 15405384 (+)
G123171 NA non-coding upstream 322068 14369093 ~ 14369913 (+)
G123169 NA non-coding upstream 325646 14365036 ~ 14366335 (+)
G123043 NA non-coding upstream 1101300 13572519 ~ 13590681 (+)
G123041 NA non-coding upstream 1121170 13566414 ~ 13570811 (+)
G123039 NA non-coding upstream 1145681 13546064 ~ 13546300 (+)
G123295 NA non-coding downstream 570173 15262949 ~ 15340169 (+)
G123386 NA non-coding downstream 996825 15689601 ~ 15689963 (+)
G123388 NA non-coding downstream 1101632 15794408 ~ 15795149 (+)
G123468 NA non-coding downstream 1793050 16485826 ~ 16489952 (+)
G123525 NA non-coding downstream 1958766 16651542 ~ 16651964 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other upstream 330445 14327632 ~ 14361536 (+)
AMCG00002393 NA other upstream 1562284 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 1621149 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 1640010 13031759 ~ 13051971 (+)
G122746 NA other upstream 2551516 12133786 ~ 12140465 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 2265385 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 2283512 16976288 ~ 16985906 (+)
G123807 NA other downstream 3222660 17915436 ~ 17984730 (+)
G123989 NA other downstream 4139238 18832014 ~ 18838531 (+)
AMCG00002562 LOC106579813 other downstream 4380917 19073693 ~ 19127947 (+)

Expression



Co-expression Network