G123204


Basic Information

Item Value
gene id G123204
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 14691970 ~ 14692999 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154473
gcaaacgtacaaaatcagcaggggatcaaatacttttttcccctcactgtaacattttttgtttgcattcattCGTTTATGGACAGCTGTCAATTCTGATAAACATTTTTGCAACTATATTCTCTCAGCTGCATGACCAGCACCCATAATGCAGGCTTTTAGAAATAATGTGTTTAGCTGACGCAATACTATAAACACTAGAAGAAAGCCATAGTCCAACGATTGTGATTGTGGGTGTTTATTTGGATTTAATCTTCATGACAGACAGGGATAAACACTCACCAAACCACAAAAACTAACACATGAAAAACCACCTAATAACAGTAAAAGCTCATTCAAGTTCCTTCATGGCTTCATTCTGTGATTTGTCTTCTTGGTCCAAGTCCATTCCTCTGCCCTTATACAGAGATACATCACTGTGTTTccatcagtttttatttcatcCTTTTTATTTGAGCTTTATTCTGGGTCAACAGCAGTTTCAGAGGAATCGGGTTCAAGTGTAGTTTCCGTATCAGAAGCACAGGTTAGATACACTCAAATACTACATTCTCTATCTAATTTCTCCTTCAAGCTGAaccaatgcaatacaatacaatcagcCTCGACCATTTGCACCATCAGGAAATGAGATGCCAATGATAACAATTCTACGTAGCTGTCTCTCCTCAATGAGTCCCCATGTTTCAGAAGTATATCATCTTCTCTTCAGTGCCACAGAAAtccacaatcaaataaaaataggcACAGATGacaattgaaataaacaaaaacactctgCTTTTCAAGGCAGTACATACACATTGGAGAACACATTACTTTCAGTGACAGTGAAGTCATGATATTTGAACCACGCTTGGCACAAGGCTCTCATTGAGTCCTGACCCTGAGAACACAAAATAATCCCACGCAGAAGGAGAGCTGTGCAGACTACAAGATACGCAGATCACTTTGGTAAGTTATGCATTACATACAGAgtagtacagtgagggaaaaaagtatttgatcccctgctgattttgtacgtttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154473 True 1030 lncRNA 0.39 1 14691970 14692999

Neighbor

gene id symbol gene type direction distance location
AMCG00002445 fignl1 coding downstream 9541 14680384 ~ 14682429 (-)
AMCG00002438 NA coding downstream 322150 14365055 ~ 14369820 (-)
AMCG00002435 NA coding downstream 540125 14127804 ~ 14151845 (-)
AMCG00002436 NA coding downstream 590571 14070785 ~ 14101399 (-)
AMCG00002434 NA coding downstream 648066 13990906 ~ 14043904 (-)
AMCG00002448 NA coding upstream 3399 14696398 ~ 14731127 (-)
AMCG00002447 NA coding upstream 68838 14761837 ~ 14787948 (-)
AMCG00002446 NA coding upstream 102088 14795087 ~ 14849774 (-)
AMCG00002452 LOC104940895 coding upstream 218456 14911455 ~ 14920505 (-)
AMCG00002453 NA coding upstream 283107 14976106 ~ 15005344 (-)
G123179 NA non-coding downstream 97428 14588809 ~ 14594542 (-)
G123178 NA non-coding downstream 103212 14587214 ~ 14588758 (-)
G123177 NA non-coding downstream 124903 14566247 ~ 14567067 (-)
G123175 NA non-coding downstream 148950 14542821 ~ 14543020 (-)
G123152 NA non-coding downstream 580769 14078244 ~ 14111201 (-)
G123346 NA non-coding upstream 788145 15481144 ~ 15483716 (-)
G123385 NA non-coding upstream 994456 15687455 ~ 15689341 (-)
G123401 NA non-coding upstream 1029934 15722933 ~ 15723137 (-)
G123405 NA non-coding upstream 1097606 15790605 ~ 15795172 (-)
G123452 NA non-coding upstream 1431283 16124282 ~ 16127405 (-)
AMCG00002421 sec61b,LOC102796100 other downstream 1037723 13649227 ~ 13654247 (-)
G122862 NA other downstream 1662564 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 2685618 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 2819108 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 2837079 11848470 ~ 11854891 (-)
G123263 NA other upstream 248261 14941260 ~ 14946311 (-)
G123585 NA other upstream 2143157 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 2265163 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 2997009 17690008 ~ 17706289 (-)
G123829 NA other upstream 3229453 17922452 ~ 17989465 (-)

Expression


Co-expression Network