G123385


Basic Information

Item Value
gene id G123385
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 15687455 ~ 15689341 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154710
caggaGTTCCTCGGGTGGCCCAGTGTCAGTTCTCTTTGCCTCTCAGGCTAGTTTGCTACCCTTCATCTCCTTCAAAGAACGCCAATTACAAACTTACCATCGACACAAATAAACCTCCTGTCAACCTACTAGAAGTCTTCCCAGACTTTGTGGAGAAATCTGAAGATGAGATTGTGAACGCTCTTGGATTCCAGTTGATAGCTGGTTCCAGAGTCACTTTGCTGGCATCAAAAACCTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154710 True 240 lncRNA 0.47 2 15687455 15689341

Neighbor

gene id symbol gene type direction distance location
AMCG00002464 LOC107714420,LOC107697280,LOC107720166,LOC107661006,LOC107581689,LOC107551731 coding downstream 57366 15626198 ~ 15630089 (-)
AMCG00002463 crtap,LOC106588754,LOC103394375 coding downstream 71190 15607041 ~ 15616265 (-)
AMCG00002460 fbxl2,LOC107742856,LOC107706183,LOC107696556 coding downstream 153443 15508448 ~ 15534012 (-)
AMCG00002455 LOC102778215 coding downstream 324887 15338087 ~ 15362568 (-)
AMCG00002454 NA coding downstream 575589 15060847 ~ 15111866 (-)
AMCG00002470 NA coding upstream 133888 15823229 ~ 15837658 (-)
AMCG00002472 NA coding upstream 149538 15838879 ~ 15923127 (-)
AMCG00002473 LOC107666842,LOC103361314,LOC100691736,LOC102304281,LOC102192906 coding upstream 252765 15942106 ~ 15950022 (-)
AMCG00002474 NA coding upstream 261892 15951233 ~ 15989035 (-)
AMCG00002475 eomes,LOC105012780 coding upstream 349060 16038401 ~ 16045090 (-)
G123346 NA non-coding downstream 203739 15481144 ~ 15483716 (-)
G123204 NA non-coding downstream 994456 14691970 ~ 14692999 (-)
G123179 NA non-coding downstream 1092913 14588809 ~ 14594542 (-)
G123178 NA non-coding downstream 1098697 14587214 ~ 14588758 (-)
G123177 NA non-coding downstream 1120388 14566247 ~ 14567067 (-)
G123401 NA non-coding upstream 33592 15722933 ~ 15723137 (-)
G123405 NA non-coding upstream 101264 15790605 ~ 15795172 (-)
G123452 NA non-coding upstream 434941 16124282 ~ 16127405 (-)
G123488 NA non-coding upstream 790688 16480029 ~ 16480293 (-)
G123489 NA non-coding upstream 792227 16481568 ~ 16483051 (-)
G123263 NA other downstream 741144 14941260 ~ 14946311 (-)
AMCG00002421 sec61b,LOC102796100 other downstream 2033208 13649227 ~ 13654247 (-)
G122862 NA other downstream 2658049 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 3681103 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 3814593 11869607 ~ 11872862 (-)
G123585 NA other upstream 1146815 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 1268821 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 2000667 17690008 ~ 17706289 (-)
G123829 NA other upstream 2233111 17922452 ~ 17989465 (-)
AMCG00002533 ulk4,LOC107704090 other upstream 2244123 17933464 ~ 18041573 (-)

Expression


Co-expression Network