G123386


Basic Information

Item Value
gene id G123386
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 15689601 ~ 15689963 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154711
taacacatacactcacctaaaggattattaggaacaccatactaatactttcgccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggatagcatcttgcagtcgatggagatttgtgggatgcacatccagggcacgaagctcctgttccaccacatcccaaagatgctctattgggttgagatctggtgaatgtgggggccagtttagtacagtgaactcattgtcatgttcaagaaaccaatttgaaatgatttgtgACATgttgcattatcctgctggaagtagccatcagaggatgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154711 True 363 lncRNA 0.44 1 15689601 15689963

Neighbor

gene id symbol gene type direction distance location
AMCG00002465 bbs9 coding upstream 34067 15643729 ~ 15655534 (+)
AMCG00002462 NA coding upstream 65855 15617380 ~ 15623746 (+)
AMCG00002461 NA coding upstream 83103 15579732 ~ 15606498 (+)
AMCG00002459 ubp1,LOC107706185 coding upstream 183867 15484471 ~ 15505734 (+)
AMCG00002458 clasp2 coding upstream 205945 15434910 ~ 15483656 (+)
AMCG00002466 bbs9 coding downstream 24292 15714255 ~ 15723162 (+)
AMCG00002467 NA coding downstream 108011 15797974 ~ 15821024 (+)
AMCG00002468 NA coding downstream 161384 15851347 ~ 15852485 (+)
AMCG00002469 tbx20,LOC107719124,LOC107686728,LOC107600539,LOC107737833 coding downstream 232842 15922805 ~ 15934434 (+)
AMCG00002471 NA coding downstream 280121 15970084 ~ 15973147 (+)
G123295 NA non-coding upstream 349432 15262949 ~ 15340169 (+)
G123197 NA non-coding upstream 996825 14691981 ~ 14692776 (+)
G123171 NA non-coding upstream 1319688 14369093 ~ 14369913 (+)
G123169 NA non-coding upstream 1323266 14365036 ~ 14366335 (+)
G123043 NA non-coding upstream 2098920 13572519 ~ 13590681 (+)
G123388 NA non-coding downstream 104445 15794408 ~ 15795149 (+)
G123468 NA non-coding downstream 795863 16485826 ~ 16489952 (+)
G123525 NA non-coding downstream 961579 16651542 ~ 16651964 (+)
G123526 NA non-coding downstream 963536 16653499 ~ 16654884 (+)
G123568 NA non-coding downstream 1102137 16792100 ~ 16792799 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other upstream 1328065 14327632 ~ 14361536 (+)
AMCG00002393 NA other upstream 2559904 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 2618769 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 2637630 13031759 ~ 13051971 (+)
G122746 NA other upstream 3549136 12133786 ~ 12140465 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 1268198 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 1286325 16976288 ~ 16985906 (+)
G123807 NA other downstream 2225473 17915436 ~ 17984730 (+)
G123989 NA other downstream 3142051 18832014 ~ 18838531 (+)
AMCG00002562 LOC106579813 other downstream 3383730 19073693 ~ 19127947 (+)

Expression


Co-expression Network