Gene
RNA
| Item | Value |
|---|---|
| gene id | G123488 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 16480029 ~ 16480293 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU154833 | True | 265 | lncRNA | 0.44 | 1 | 16480029 | 16480293 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002477 | NA | coding | downstream | 325464 | 16129440 ~ 16154565 (-) |
| AMCG00002475 | eomes,LOC105012780 | coding | downstream | 434939 | 16038401 ~ 16045090 (-) |
| AMCG00002474 | NA | coding | downstream | 490994 | 15951233 ~ 15989035 (-) |
| AMCG00002473 | LOC107666842,LOC103361314,LOC100691736,LOC102304281,LOC102192906 | coding | downstream | 530007 | 15942106 ~ 15950022 (-) |
| AMCG00002472 | NA | coding | downstream | 556902 | 15838879 ~ 15923127 (-) |
| AMCG00002481 | NA | coding | upstream | 88043 | 16568336 ~ 16582900 (-) |
| AMCG00002487 | NA | coding | upstream | 178605 | 16658898 ~ 16672579 (-) |
| AMCG00002488 | NA | coding | upstream | 209543 | 16689836 ~ 16734523 (-) |
| AMCG00002486 | NA | coding | upstream | 272255 | 16752548 ~ 16753496 (-) |
| AMCG00002491 | zdhhc3,LOC103144443 | coding | upstream | 312263 | 16792556 ~ 16813272 (-) |
| G123452 | NA | non-coding | downstream | 352624 | 16124282 ~ 16127405 (-) |
| G123405 | NA | non-coding | downstream | 684857 | 15790605 ~ 15795172 (-) |
| G123401 | NA | non-coding | downstream | 756892 | 15722933 ~ 15723137 (-) |
| G123385 | NA | non-coding | downstream | 790688 | 15687455 ~ 15689341 (-) |
| G123346 | NA | non-coding | downstream | 996313 | 15481144 ~ 15483716 (-) |
| G123489 | NA | non-coding | upstream | 1275 | 16481568 ~ 16483051 (-) |
| G123524 | stt3b,LOC108412618 | non-coding | upstream | 168114 | 16648407 ~ 16651454 (-) |
| G123527 | NA | non-coding | upstream | 173206 | 16653499 ~ 16654863 (-) |
| G123637 | NA | non-coding | upstream | 500538 | 16980831 ~ 16982646 (-) |
| G123642 | NA | non-coding | upstream | 514836 | 16995129 ~ 17050056 (-) |
| G123263 | NA | other | downstream | 1533718 | 14941260 ~ 14946311 (-) |
| AMCG00002421 | sec61b,LOC102796100 | other | downstream | 2825782 | 13649227 ~ 13654247 (-) |
| G122862 | NA | other | downstream | 3450623 | 13028197 ~ 13029406 (-) |
| AMCG00002368 | rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 | other | downstream | 4473677 | 11995828 ~ 12006352 (-) |
| AMCG00002351 | NA | other | downstream | 4607167 | 11869607 ~ 11872862 (-) |
| G123585 | NA | other | upstream | 355863 | 16836156 ~ 16839722 (-) |
| AMCG00002503 | NA | other | upstream | 477869 | 16958162 ~ 16974301 (-) |
| AMCG00002524 | NA | other | upstream | 1209715 | 17690008 ~ 17706289 (-) |
| G123829 | NA | other | upstream | 1442159 | 17922452 ~ 17989465 (-) |
| AMCG00002533 | ulk4,LOC107704090 | other | upstream | 1453171 | 17933464 ~ 18041573 (-) |
