G123525


Basic Information

Item Value
gene id G123525
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 16651542 ~ 16651964 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154876
TGATTCAGGAAATGTTCAGGTACTTGAATGCTCCCCTTAATAAGAATTCAACTAATTGCAGCTATCATGTAGTCATTTCTTTATATTCAAGATTATTTTACTTGCTTTAATAACTAAAAAAATTGCGATGGTTAAAGTGGTGGCTGCAGACTATGCACAGGGAAGTTAAGTTTACTATAGCATCTGTTCACTTACAAAAGCATCCACGTGATGGCAGCACTCACCTGATGTATTCCTCAGCAGCTCAACATGTTTAGTTTGACACAGGCAGACAATAGTGGATTATGCCTTCTACAGGTTTCTAGTTTTCAAATCTCCATAAACTTGTCATCTTTAACTTGGTTTGtatgaaatattatatatgcatttactgCACTTaaaccaataaattaaactacaggTTAAAGTGAGCTACTTCAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154876 True 423 lncRNA 0.35 1 16651542 16651964

Neighbor

gene id symbol gene type direction distance location
AMCG00002482 LOC102294068,LOC100692553,LOC101478849 coding upstream 136 16621519 ~ 16651406 (+)
AMCG00002480 NA coding upstream 81115 16535647 ~ 16570427 (+)
AMCG00002479 NA coding upstream 192331 16343098 ~ 16459211 (+)
AMCG00002478 rbms3,LOC106588200,LOC107713827,LOC107600516,LOC107730162 coding upstream 314823 16270456 ~ 16336719 (+)
AMCG00002476 NA coding upstream 525720 16124380 ~ 16125822 (+)
AMCG00002483 gpd1l,LOC108434205,LOC103034694,LOC105023484 coding downstream 84720 16736684 ~ 16750596 (+)
AMCG00002484 NA coding downstream 102132 16754096 ~ 16769522 (+)
AMCG00002485 tmem42,LOC107394544,LOC103356608 coding downstream 117738 16769702 ~ 16774759 (+)
AMCG00002489 NA coding downstream 127864 16779828 ~ 16790437 (+)
AMCG00002498 exosc7,LOC107693297 coding downstream 161497 16813461 ~ 16819588 (+)
G123468 NA non-coding upstream 161590 16485826 ~ 16489952 (+)
G123388 NA non-coding upstream 856393 15794408 ~ 15795149 (+)
G123386 NA non-coding upstream 961579 15689601 ~ 15689963 (+)
G123295 NA non-coding upstream 1311373 15262949 ~ 15340169 (+)
G123197 NA non-coding upstream 1958766 14691981 ~ 14692776 (+)
G123526 NA non-coding downstream 1535 16653499 ~ 16654884 (+)
G123568 NA non-coding downstream 140136 16792100 ~ 16792799 (+)
G123653 NA non-coding downstream 440011 17091975 ~ 17148336 (+)
G123659 NA non-coding downstream 485449 17137413 ~ 17141435 (+)
G123797 NA non-coding downstream 1043896 17695860 ~ 17760195 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other upstream 2290006 14327632 ~ 14361536 (+)
AMCG00002393 NA other upstream 3521845 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 3580710 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 3599571 13031759 ~ 13051971 (+)
G122746 NA other upstream 4511077 12133786 ~ 12140465 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 306197 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 324324 16976288 ~ 16985906 (+)
G123807 NA other downstream 1263472 17915436 ~ 17984730 (+)
G123989 NA other downstream 2180050 18832014 ~ 18838531 (+)
AMCG00002562 LOC106579813 other downstream 2421729 19073693 ~ 19127947 (+)

Expression


Co-expression Network