G123568


Basic Information

Item Value
gene id G123568
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 16792100 ~ 16792799 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154926
tCGCTTCAgagttatatttattatgaagttACTGAGcaaatattgatattatttcatacatatGTTAACACACTTAACAGACAGAACTTTGAATTTGgtccttttattaaaatatagttgATAGCAGCTAGCTGGCAAGCTGGAGGAAATTCAAAACTGGTTCATCTAAGATGTCACCAGCCATTGTCTTGATAAAAACCCACGTCAAAGTCTGTCACCCCACCTATTCATGTGTCCCCCTTCCTATATCTATAAATcttaaggggaaaaaatagcTTTCAAGGACTGTTAAATATAGGCTAAACTTAGCGAGCAAACAATTACTTACCGATTTATTTAGCGTAAATCTTCTCCTTTTTAGAGTTGAAACAACATTCTTAAGGCACAGCTTAATTTGGTCTCATGCAAGGCACTGTTTCTGGCATTTGTGCAACATTAGGGGCTGGAGAGTGGAAGTCAATATTCAGCCTGTATTTCAATAACATCCTCCTCCACGATTTCGCCCTGGGGGGCGGCGTGTACACGGGAGGACTGCCTCTTCTCACAGCTCAGGTCGGAGAAGGGGTTAAACCAGCCCAGTGACAGCGGACCACCGAACGCTGCTTTCATGCCCTCCCAGCACGGGGTCTTCTGCCAGGTGGGGGTCTCTCCCTTCAGCCGCTCAATGCCCTGGGACGAGAATACCACCGTAAGATCCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154926 True 700 lncRNA 0.44 1 16792100 16792799

Neighbor

gene id symbol gene type direction distance location
AMCG00002489 NA coding upstream 1663 16779828 ~ 16790437 (+)
AMCG00002485 tmem42,LOC107394544,LOC103356608 coding upstream 17341 16769702 ~ 16774759 (+)
AMCG00002484 NA coding upstream 22578 16754096 ~ 16769522 (+)
AMCG00002483 gpd1l,LOC108434205,LOC103034694,LOC105023484 coding upstream 41504 16736684 ~ 16750596 (+)
AMCG00002482 LOC102294068,LOC100692553,LOC101478849 coding upstream 140694 16621519 ~ 16651406 (+)
AMCG00002498 exosc7,LOC107693297 coding downstream 20662 16813461 ~ 16819588 (+)
AMCG00002497 NA coding downstream 28900 16821699 ~ 16824223 (+)
AMCG00002494 lars2 coding downstream 63708 16856507 ~ 16900912 (+)
AMCG00002493 limd1,LOC107756905,LOC106605519,LOC106579350,LOC107688969,LOC107598949 coding downstream 113946 16906745 ~ 16914952 (+)
AMCG00002499 limd1,LOC106579350,LOC106605519 coding downstream 132518 16925317 ~ 16933518 (+)
G123526 NA non-coding upstream 137216 16653499 ~ 16654884 (+)
G123525 NA non-coding upstream 140136 16651542 ~ 16651964 (+)
G123468 NA non-coding upstream 302148 16485826 ~ 16489952 (+)
G123388 NA non-coding upstream 996951 15794408 ~ 15795149 (+)
G123386 NA non-coding upstream 1102137 15689601 ~ 15689963 (+)
G123653 NA non-coding downstream 299176 17091975 ~ 17148336 (+)
G123659 NA non-coding downstream 344614 17137413 ~ 17141435 (+)
G123797 NA non-coding downstream 903061 17695860 ~ 17760195 (+)
G123808 NA non-coding downstream 1133900 17926699 ~ 17940633 (+)
G123833 NA non-coding downstream 1258213 18051012 ~ 18052338 (+)
AMCG00002437 pcbp3,LOC108266078,LOC107657516,LOC107728912 other upstream 2430564 14327632 ~ 14361536 (+)
AMCG00002393 NA other upstream 3662403 13125378 ~ 13129697 (+)
AMCG00002388 NA other upstream 3721268 13044693 ~ 13070832 (+)
AMCG00002390 NA other upstream 3740129 13031759 ~ 13051971 (+)
G122746 NA other upstream 4651635 12133786 ~ 12140465 (+)
AMCG00002500 snrpd1,LOC105910057,LOC107655105,LOC107559756 other downstream 165362 16958161 ~ 16960082 (+)
AMCG00002496 NA other downstream 183489 16976288 ~ 16985906 (+)
G123807 NA other downstream 1122637 17915436 ~ 17984730 (+)
G123989 NA other downstream 2039215 18832014 ~ 18838531 (+)
AMCG00002562 LOC106579813 other downstream 2280894 19073693 ~ 19127947 (+)

Expression


Co-expression Network