G123585


Basic Information

Item Value
gene id G123585
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 16836156 ~ 16839722 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154950
CTCGGTGCGGTAATAACTCGCCAAAGCAGGAAGCGGGATGCAGCCCATTGAGGGGGACATGAAGTCTACGTTTTCAGCGTTTGCGTAATGTCCAAGCGCTAAATTGAGGTAGACCAACCAAAGAAGGGAGACggacatttatttatgtcaagTTAATCGGAGCAAACATGCTGTTTTCTGCAAGCTTGCGCGCCACGTTGCTGTTTGGGATACTCGTTGCATTGGCTTTCGAGATCACGGaaggCGGGCAGGTGACGCTGATACCGGATGCAGACACCTCTGTTGCCATAACTAGATCACTCTCGGGAATTAACTGCACTGTTTGCGTGAAGGACAGATCAAGCATGAAGTGCCACAAAGAGATAACACTAAAAGGAGGCCCCAATGTGTCGGTGGAGTTCACCTGTGCACAGCCCCAGGACGTCTTCACTGTGGCTATCAGCAAGAATATCGGTAAGAG

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0016137 glycoside metabolic process biological_process
GO:0016139 glycoside catabolic process biological_process
GO:1901658 glycosyl compound catabolic process biological_process
GO:1901136 carbohydrate derivative catabolic process biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154950 True 460 TUCP 0.50 2 16836156 16839722

Neighbor

gene id symbol gene type direction distance location
AMCG00002490 NA coding downstream 4885 16824229 ~ 16831271 (-)
AMCG00002491 zdhhc3,LOC103144443 coding downstream 22884 16792556 ~ 16813272 (-)
AMCG00002486 NA coding downstream 82660 16752548 ~ 16753496 (-)
AMCG00002488 NA coding downstream 101633 16689836 ~ 16734523 (-)
AMCG00002487 NA coding downstream 163577 16658898 ~ 16672579 (-)
AMCG00002492 tmem158,LOC102794155 coding upstream 7702 16847424 ~ 16848116 (-)
AMCG00002505 NA coding upstream 181697 17021419 ~ 17052806 (-)
AMCG00002504 NA coding upstream 223685 17063407 ~ 17071925 (-)
AMCG00002508 mturn,LOC107572558,LOC107559763 coding upstream 240782 17080504 ~ 17090314 (-)
AMCG00002509 eaf1 coding upstream 253184 17092906 ~ 17097083 (-)
G123527 NA non-coding downstream 181293 16653499 ~ 16654863 (-)
G123524 stt3b,LOC108412618 non-coding downstream 184702 16648407 ~ 16651454 (-)
G123489 NA non-coding downstream 353105 16481568 ~ 16483051 (-)
G123488 NA non-coding downstream 355863 16480029 ~ 16480293 (-)
G123452 NA non-coding downstream 708751 16124282 ~ 16127405 (-)
G123637 NA non-coding upstream 141109 16980831 ~ 16982646 (-)
G123642 NA non-coding upstream 155407 16995129 ~ 17050056 (-)
G123646 NA non-coding upstream 235590 17075312 ~ 17075549 (-)
G123705 NA non-coding upstream 394648 17234370 ~ 17238544 (-)
G123788 NA non-coding upstream 820345 17660067 ~ 17675110 (-)
G123263 NA other downstream 1889845 14941260 ~ 14946311 (-)
AMCG00002421 sec61b,LOC102796100 other downstream 3181909 13649227 ~ 13654247 (-)
G122862 NA other downstream 3806750 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 4829804 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 4963294 11869607 ~ 11872862 (-)
AMCG00002503 NA other upstream 118440 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 850286 17690008 ~ 17706289 (-)
G123829 NA other upstream 1082730 17922452 ~ 17989465 (-)
AMCG00002533 ulk4,LOC107704090 other upstream 1093742 17933464 ~ 18041573 (-)
AMCG00002584 NA other upstream 4807333 21647055 ~ 21678545 (-)

Expression


Co-expression Network