Gene
RNA
| Item | Value |
|---|---|
| gene id | G123876 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 18205668 ~ 18206132 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU155304 | True | 465 | lncRNA | 0.44 | 1 | 18205668 | 18206132 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002539 | trim71 | coding | downstream | 1185 | 18203377 ~ 18204483 (-) |
| AMCG00002536 | trim71,LOC107657583,LOC107551222,LOC107723073,LOC107601676,LOC107704101,LOC107751884 | coding | downstream | 23041 | 18172131 ~ 18182627 (-) |
| AMCG00002532 | NA | coding | downstream | 143603 | 18058532 ~ 18062065 (-) |
| AMCG00002531 | NA | coding | downstream | 302858 | 17876005 ~ 17902810 (-) |
| AMCG00002530 | NA | coding | downstream | 348600 | 17838579 ~ 17857068 (-) |
| AMCG00002537 | NA | coding | upstream | 9663 | 18215795 ~ 18224850 (-) |
| AMCG00002538 | NA | coding | upstream | 20836 | 18226968 ~ 18241221 (-) |
| AMCG00002542 | NA | coding | upstream | 114007 | 18320139 ~ 18335125 (-) |
| AMCG00002541 | snrk,snrka,LOC107551216,LOC107723077,LOC107601674,LOC107657578 | coding | upstream | 177688 | 18383820 ~ 18389641 (-) |
| AMCG00002543 | snrk,LOC107101967 | coding | upstream | 220592 | 18426724 ~ 18427338 (-) |
| G123845 | NA | non-coding | downstream | 153336 | 18051097 ~ 18052332 (-) |
| G123824 | ctnnb1 | non-coding | downstream | 390202 | 17811518 ~ 17815466 (-) |
| G123788 | NA | non-coding | downstream | 530558 | 17660067 ~ 17675110 (-) |
| G123705 | NA | non-coding | downstream | 967124 | 17234370 ~ 17238544 (-) |
| G123646 | NA | non-coding | downstream | 1130119 | 17075312 ~ 17075549 (-) |
| G123926 | NA | non-coding | upstream | 263102 | 18469234 ~ 18469607 (-) |
| G123961 | NA | non-coding | upstream | 378577 | 18584709 ~ 18585930 (-) |
| G123981 | NA | non-coding | upstream | 576013 | 18782145 ~ 18782366 (-) |
| G124068 | NA | non-coding | upstream | 1077746 | 19283878 ~ 19284293 (-) |
| G124175 | NA | non-coding | upstream | 2095940 | 20302072 ~ 20334454 (-) |
| AMCG00002533 | ulk4,LOC107704090 | other | downstream | 164095 | 17933464 ~ 18041573 (-) |
| G123829 | NA | other | downstream | 216203 | 17922452 ~ 17989465 (-) |
| AMCG00002524 | NA | other | downstream | 499379 | 17690008 ~ 17706289 (-) |
| AMCG00002503 | NA | other | downstream | 1231367 | 16958162 ~ 16974301 (-) |
| G123585 | NA | other | downstream | 1365946 | 16836156 ~ 16839722 (-) |
| AMCG00002584 | NA | other | upstream | 3440923 | 21647055 ~ 21678545 (-) |
| AMCG00002596 | NA | other | upstream | 3695160 | 21901292 ~ 21902597 (-) |
| G124719 | NA | other | upstream | 4879862 | 23085994 ~ 23296115 (-) |
| AMCG00002629 | sqle,LOC106579093,LOC102798444,LOC106605546 | other | upstream | 4975789 | 23181921 ~ 23192656 (-) |
| G124829 | NA | other | upstream | 6055433 | 24261565 ~ 24261823 (-) |
