G123961


Basic Information

Item Value
gene id G123961
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 18584709 ~ 18585930 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU155412
ttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttgcttttttattattatttgataagTGTACAGATtgagattttattatttgttttatgctgtTGTTTGTCACAAAAAATACCCTTTAAGGAATATAtctgtaatgtttaaattaagctACTTTCTAGGTATTAAACCTGATTATTGGCATGCATCTTTACAAGTTGTTTAAGAACAATTTAAgctaaaagaagaaaaaaaaatgcaatttataaatTCACTGgttaaaagaaaattattttttatatattgcttTACAATTATGAGTAACTATCTTGCCATgctgtctaaaaataaaatagtgtattgctttttttatataaaagcatTGAAGTAATATTCTCGCTTAGTTAACATAATGCATTGCCTACTAATTCTGAGCTGGTAACTCATACTGAATTAAATCAGTGGCTGAAGGAAATGTACTTTTTCTATTTAAGTGACATGAATGTAACAGGGTTGCTCAGGGTTGAATTTGGAGCCTGTTGAAAACTGGTCGTTCAGACTagtgagatttttatttttatttttggagtaATTTGTGTAGTAATCTTGATTTGAGTTGAGGAGGGGGACACCAAACATTTTTTTGCTATTTAGTTTGCTTTAAGGTTGTACAATAATAGATGTCAAATATAACAATTACAGTActtgtattttcagtttttgtttcttctttctttcgTCACTTTTGACGtcaaaacgttgacccacccgctaatagaaaactgcacaacctgtactcagttgcggcttcatttttagttgaTGCCAGATCATCAGAAATGTAACCTCTATGAtatacaggtttttagtttgctattagcaggtgggtcaaagttttgatttaatccagcccaacATCTTCTCTGCACTAACCTACACCAGATAATTTGACCAATCGTTGAAACTTTTTTCAGTGATGACTCTTGTGCTTTGCATATTTTGTCACAATGCAAGATTTAAAAGCTGTAAAAAGgagtaaagtaaaatatttcagGGAATGCaaataagaggaaaaaaaaagaaaaggatattAACTTATCTCTTTCTTAAGAGAAAATCTTGTATTCATAATGTGCTTTGCTTCATTCTGTAAATAGCGAAATGGCTTATGAATCTTAATTGTAACCTTTTCAGGTATTTTTGTACAAATAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155412 True 1222 lncRNA 0.29 1 18584709 18585930

Neighbor

gene id symbol gene type direction distance location
AMCG00002550 NA coding downstream 11727 18554798 ~ 18572982 (-)
AMCG00002549 NA coding downstream 39634 18528653 ~ 18545075 (-)
AMCG00002545 rpl14 coding downstream 76039 18504897 ~ 18508670 (-)
AMCG00002544 NA coding downstream 92529 18482733 ~ 18492180 (-)
AMCG00002543 snrk,LOC107101967 coding downstream 157371 18426724 ~ 18427338 (-)
AMCG00002547 grb10,LOC106605415,LOC106579904 coding upstream 148 18586078 ~ 18602108 (-)
AMCG00002552 NA coding upstream 43719 18629649 ~ 18632830 (-)
AMCG00002548 NA coding upstream 115965 18701895 ~ 18713091 (-)
AMCG00002551 NA coding upstream 137467 18723397 ~ 18759586 (-)
AMCG00002557 NA coding upstream 200190 18786120 ~ 18786641 (-)
G123926 NA non-coding downstream 115102 18469234 ~ 18469607 (-)
G123876 NA non-coding downstream 378577 18205668 ~ 18206132 (-)
G123845 NA non-coding downstream 532377 18051097 ~ 18052332 (-)
G123824 ctnnb1 non-coding downstream 769243 17811518 ~ 17815466 (-)
G123788 NA non-coding downstream 909599 17660067 ~ 17675110 (-)
G123981 NA non-coding upstream 196215 18782145 ~ 18782366 (-)
G124068 NA non-coding upstream 697948 19283878 ~ 19284293 (-)
G124175 NA non-coding upstream 1716142 20302072 ~ 20334454 (-)
G124222 NA non-coding upstream 1954377 20540307 ~ 20540523 (-)
G124327 NA non-coding upstream 2393167 20979097 ~ 21116735 (-)
AMCG00002533 ulk4,LOC107704090 other downstream 543136 17933464 ~ 18041573 (-)
G123829 NA other downstream 595244 17922452 ~ 17989465 (-)
AMCG00002524 NA other downstream 878420 17690008 ~ 17706289 (-)
AMCG00002503 NA other downstream 1610408 16958162 ~ 16974301 (-)
G123585 NA other downstream 1744987 16836156 ~ 16839722 (-)
AMCG00002584 NA other upstream 3061125 21647055 ~ 21678545 (-)
AMCG00002596 NA other upstream 3315362 21901292 ~ 21902597 (-)
G124719 NA other upstream 4500064 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other upstream 4595991 23181921 ~ 23192656 (-)
G124829 NA other upstream 5675635 24261565 ~ 24261823 (-)

Expression


Co-expression Network