Gene
RNA
| Item | Value |
|---|---|
| gene id | G124067 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 19283878 ~ 19284277 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU155556 | True | 400 | lncRNA | 0.52 | 1 | 19283878 | 19284277 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002553 | NA | coding | upstream | 473499 | 18799860 ~ 18810379 (+) |
| AMCG00002546 | pomgnt2,LOC106605419,LOC106579937 | coding | upstream | 825088 | 18457051 ~ 18458790 (+) |
| AMCG00002540 | LOC106606077 | coding | upstream | 937680 | 18337756 ~ 18346198 (+) |
| AMCG00002534 | cnot10 | coding | upstream | 1122314 | 18145212 ~ 18161564 (+) |
| AMCG00002535 | LOC107751889,LOC107704104 | coding | upstream | 1232962 | 17998046 ~ 18050916 (+) |
| AMCG00002565 | nsun2,LOC107595606 | coding | downstream | 83039 | 19367316 ~ 19385301 (+) |
| AMCG00002564 | med10,LOC106588698,LOC107691542,LOC107595625,LOC107584362 | coding | downstream | 122781 | 19407058 ~ 19410399 (+) |
| AMCG00002571 | irx2,irx2a,LOC107558646,LOC107554509 | coding | downstream | 745881 | 20030158 ~ 20033860 (+) |
| AMCG00002572 | LOC106593690 | coding | downstream | 945450 | 20229727 ~ 20238940 (+) |
| AMCG00002574 | NA | coding | downstream | 1086266 | 20370543 ~ 20396006 (+) |
| G123997 | NA | non-coding | upstream | 419913 | 18862678 ~ 18863965 (+) |
| G123993 | NA | non-coding | upstream | 422234 | 18844368 ~ 18861644 (+) |
| G123950 | NA | non-coding | upstream | 697851 | 18584169 ~ 18586027 (+) |
| G123943 | NA | non-coding | upstream | 727316 | 18554485 ~ 18556562 (+) |
| G123916 | NA | non-coding | upstream | 774104 | 18504888 ~ 18509774 (+) |
| G124070 | NA | non-coding | downstream | 49522 | 19333799 ~ 19384234 (+) |
| G124094 | NA | non-coding | downstream | 106846 | 19391123 ~ 19394724 (+) |
| G124150 | NA | non-coding | downstream | 877270 | 20161547 ~ 20161753 (+) |
| G124165 | NA | non-coding | downstream | 956308 | 20240585 ~ 20240879 (+) |
| G124178 | NA | non-coding | downstream | 1075046 | 20359323 ~ 20359695 (+) |
| AMCG00002561 | NA | other | upstream | 150311 | 19130067 ~ 19133567 (+) |
| AMCG00002562 | LOC106579813 | other | upstream | 155931 | 19073693 ~ 19127947 (+) |
| G123989 | NA | other | upstream | 445347 | 18832014 ~ 18838531 (+) |
| G123807 | NA | other | upstream | 1299148 | 17915436 ~ 17984730 (+) |
| AMCG00002496 | NA | other | upstream | 2297972 | 16976288 ~ 16985906 (+) |
| AMCG00002573 | NA | other | downstream | 957571 | 20241848 ~ 20333030 (+) |
| AMCG00002622 | NA | other | downstream | 3703268 | 22987545 ~ 22990164 (+) |
| AMCG00002623 | sqle,LOC106579093,LOC106605546,LOC107686341 | other | downstream | 3783847 | 23068124 ~ 23180043 (+) |
| G124689 | NA | other | downstream | 3868371 | 23152648 ~ 23290535 (+) |
| G124769 | NA | other | downstream | 4393658 | 23677935 ~ 23681385 (+) |
