G124150


Basic Information

Item Value
gene id G124150
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 20161547 ~ 20161753 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU155657
gatctgcctcgtctaaacccatgttgactatctccaagaatatggttttcattaagatgctcctctattttctgtctaatcattttgtccaacattttacaggtgatgcaggtgagactgattggtctgtaatttcctggctcagttttgtcccctttcttgtggattggtatgacatttgctgtcttccagtcagttggcacatcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155657 True 207 lncRNA 0.42 1 20161547 20161753

Neighbor

gene id symbol gene type direction distance location
AMCG00002571 irx2,irx2a,LOC107558646,LOC107554509 coding upstream 127687 20030158 ~ 20033860 (+)
AMCG00002564 med10,LOC106588698,LOC107691542,LOC107595625,LOC107584362 coding upstream 751148 19407058 ~ 19410399 (+)
AMCG00002565 nsun2,LOC107595606 coding upstream 776246 19367316 ~ 19385301 (+)
AMCG00002553 NA coding upstream 1351168 18799860 ~ 18810379 (+)
AMCG00002546 pomgnt2,LOC106605419,LOC106579937 coding upstream 1702757 18457051 ~ 18458790 (+)
AMCG00002572 LOC106593690 coding downstream 67974 20229727 ~ 20238940 (+)
AMCG00002574 NA coding downstream 208790 20370543 ~ 20396006 (+)
AMCG00002575 slc6a3,LOC108272311,LOC107558633,LOC107564665 coding downstream 250083 20411836 ~ 20426798 (+)
AMCG00002576 NA coding downstream 295990 20457743 ~ 20463329 (+)
AMCG00002577 NA coding downstream 525597 20687350 ~ 20868956 (+)
G124094 NA non-coding upstream 766823 19391123 ~ 19394724 (+)
G124070 NA non-coding upstream 777313 19333799 ~ 19384234 (+)
G124067 NA non-coding upstream 877270 19283878 ~ 19284277 (+)
G123997 NA non-coding upstream 1297582 18862678 ~ 18863965 (+)
G123993 NA non-coding upstream 1299903 18844368 ~ 18861644 (+)
G124165 NA non-coding downstream 78832 20240585 ~ 20240879 (+)
G124178 NA non-coding downstream 197570 20359323 ~ 20359695 (+)
G124232 NA non-coding downstream 399869 20561622 ~ 20562263 (+)
G124331 NA non-coding downstream 963262 21125015 ~ 21170354 (+)
G124364 NA non-coding downstream 1492029 21653782 ~ 21654725 (+)
AMCG00002561 NA other upstream 1027980 19130067 ~ 19133567 (+)
AMCG00002562 LOC106579813 other upstream 1033600 19073693 ~ 19127947 (+)
G123989 NA other upstream 1323016 18832014 ~ 18838531 (+)
G123807 NA other upstream 2176817 17915436 ~ 17984730 (+)
AMCG00002496 NA other upstream 3175641 16976288 ~ 16985906 (+)
AMCG00002573 NA other downstream 80095 20241848 ~ 20333030 (+)
AMCG00002622 NA other downstream 2825792 22987545 ~ 22990164 (+)
AMCG00002623 sqle,LOC106579093,LOC106605546,LOC107686341 other downstream 2906371 23068124 ~ 23180043 (+)
G124689 NA other downstream 2990895 23152648 ~ 23290535 (+)
G124769 NA other downstream 3516182 23677935 ~ 23681385 (+)

Expression


Co-expression Network