G124232


Basic Information

Item Value
gene id G124232
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 20561622 ~ 20562263 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU155746
caacactttcacccagttctcctctgaatcattcagatgttcgtTGGCAatcttcagacgggcctgtacttGTGCTTTCTTCAGCAGGGGggccttgcgggcgctgcaggatttcagtccttcacggcatagtgtgttaccaattgttttcttggtgactatggttcCAGCtaccttgagatcattaacaagatcctcccgtgtaattctgggctgattcctcaccgttctcatgatcactgaaactccacgaggtgagatcttgcatggagccccagaccgagggagactgacagttattttgtgtttcttccatttgcgaataatcgcaccaactgttgtcaccttctcaccaactgttgtcaccttctccctttaagagagtgctcctaatctcagctcgttacctgtataaaaggcacctgggagccagaaatcttgctgattgataggggatcaaatacttatttccctcattaacatgcaaatcaatgtataacttttttgaaatgcatttttctggattgttttgttgttattctgtctctcactgttaaaatacacctaccattgaaattatagactgatcatttctttgtcagtgggcaaacgttcaaaatcagcaggggatcaaatactttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU155746 True 642 lncRNA 0.43 1 20561622 20562263

Neighbor

gene id symbol gene type direction distance location
AMCG00002576 NA coding upstream 98293 20457743 ~ 20463329 (+)
AMCG00002575 slc6a3,LOC108272311,LOC107558633,LOC107564665 coding upstream 134824 20411836 ~ 20426798 (+)
AMCG00002574 NA coding upstream 165616 20370543 ~ 20396006 (+)
AMCG00002572 LOC106593690 coding upstream 322682 20229727 ~ 20238940 (+)
AMCG00002571 irx2,irx2a,LOC107558646,LOC107554509 coding upstream 527762 20030158 ~ 20033860 (+)
AMCG00002577 NA coding downstream 125087 20687350 ~ 20868956 (+)
AMCG00002581 NA coding downstream 459673 21021936 ~ 21054156 (+)
AMCG00002582 NA coding downstream 492243 21054506 ~ 21070496 (+)
AMCG00002587 NA coding downstream 1112808 21675071 ~ 21693525 (+)
AMCG00002588 NA coding downstream 1137423 21699686 ~ 21742911 (+)
G124178 NA non-coding upstream 201927 20359323 ~ 20359695 (+)
G124165 NA non-coding upstream 320743 20240585 ~ 20240879 (+)
G124150 NA non-coding upstream 399869 20161547 ~ 20161753 (+)
G124094 NA non-coding upstream 1166898 19391123 ~ 19394724 (+)
G124070 NA non-coding upstream 1177388 19333799 ~ 19384234 (+)
G124331 NA non-coding downstream 562752 21125015 ~ 21170354 (+)
G124364 NA non-coding downstream 1091519 21653782 ~ 21654725 (+)
G124403 NA non-coding downstream 1232731 21794994 ~ 21795202 (+)
G124405 NA non-coding downstream 1233052 21795315 ~ 21795957 (+)
G124408 tatdn1 non-coding downstream 1243357 21805620 ~ 21810821 (+)
AMCG00002573 NA other upstream 228592 20241848 ~ 20333030 (+)
AMCG00002561 NA other upstream 1428055 19130067 ~ 19133567 (+)
AMCG00002562 LOC106579813 other upstream 1433675 19073693 ~ 19127947 (+)
G123989 NA other upstream 1723091 18832014 ~ 18838531 (+)
G123807 NA other upstream 2576892 17915436 ~ 17984730 (+)
AMCG00002622 NA other downstream 2425282 22987545 ~ 22990164 (+)
AMCG00002623 sqle,LOC106579093,LOC106605546,LOC107686341 other downstream 2505861 23068124 ~ 23180043 (+)
G124689 NA other downstream 2590385 23152648 ~ 23290535 (+)
G124769 NA other downstream 3115672 23677935 ~ 23681385 (+)
G124863 NA other downstream 3859989 24422252 ~ 24422613 (+)

Expression


Co-expression Network