G124582


Basic Information

Item Value
gene id G124582
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 22597999 ~ 22598555 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU156148
AGATTTTGTCTTTGACTATCTCTTCTGtatgtaataaaacaagttCACAGAATCCGTTTAAACCTTTCCCATGCCCCTTCATAGTTCTGTGGGGGATCCAGCGAAATGCTTTACAGGGAAAAGGGCCTTGGGgtctgaatattattttaaaacatactcGTTCTATTTATAGTTAATTTACACTATGTGATCTAATCAAAGGATATTTTGGTTTGTCATCTGGTTTTAGAAGACATTCTTTtgcaaattgtaattaaaatgtattatttaatgtgcAACAATCATTTGTCAGGACAGACAattttaagaacaaaacaagcataCACTGTTTTATAACTGGTGGAGTTAAAATGGCTACCAATGGTCTTTCAAGTActgtgaatttattttcagCTATTGTAGAGTGCACTTcaggtaaacaaaaaaataaaaaataataaggccATTTAAGACGGATACATTTCTGCCTTTACTAACCTCTCACAATTTCTTCAattttgaaaaaactaaataaaacgtGATTTTTATGTATGACTATGTACAATGTAGTATTTATT

Function

GO: NA

KEGG:

id description
ko04725 Cholinergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU156148 True 557 lncRNA 0.31 1 22597999 22598555

Neighbor

gene id symbol gene type direction distance location
AMCG00002608 LOC106606163,LOC106595977 coding downstream 29011 22561117 ~ 22568988 (-)
AMCG00002606 LOC106595460 coding downstream 208614 22381544 ~ 22389385 (-)
AMCG00002605 taf2 coding downstream 217207 22354118 ~ 22380792 (-)
AMCG00002603 NA coding downstream 249495 22323186 ~ 22348504 (-)
AMCG00002602 NA coding downstream 274949 22302321 ~ 22323050 (-)
AMCG00002610 NA coding upstream 69 22598624 ~ 22620244 (-)
AMCG00002611 has2,LOC107673001,LOC107596747 coding upstream 95651 22694206 ~ 22705745 (-)
AMCG00002616 derl1,LOC107593655,LOC107736822,LOC107657695,LOC107699495 coding upstream 310635 22909190 ~ 22926813 (-)
AMCG00002615 NA coding upstream 356721 22955276 ~ 22958920 (-)
AMCG00002614 NA coding upstream 361160 22959715 ~ 22968693 (-)
G124535 NA non-coding downstream 159270 22436886 ~ 22438729 (-)
G124434 NA non-coding downstream 644328 21941177 ~ 21953671 (-)
G124431 NA non-coding downstream 672143 21925607 ~ 21925856 (-)
G124429 NA non-coding downstream 679084 21918700 ~ 21918915 (-)
G124402 NA non-coding downstream 803011 21794773 ~ 21794988 (-)
G124591 NA non-coding upstream 54927 22653482 ~ 22653719 (-)
G124669 NA non-coding upstream 398264 22996819 ~ 22999108 (-)
G124765 NA non-coding upstream 1057429 23655984 ~ 23663572 (-)
G124779 NA non-coding upstream 1275123 23873678 ~ 23928150 (-)
G124873 NA non-coding upstream 1812474 24411029 ~ 24411336 (-)
AMCG00002596 NA other downstream 695402 21901292 ~ 21902597 (-)
AMCG00002584 NA other downstream 919454 21647055 ~ 21678545 (-)
AMCG00002533 ulk4,LOC107704090 other downstream 4556426 17933464 ~ 18041573 (-)
G123829 NA other downstream 4608534 17922452 ~ 17989465 (-)
AMCG00002524 NA other downstream 4891710 17690008 ~ 17706289 (-)
G124719 NA other upstream 487439 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other upstream 583366 23181921 ~ 23192656 (-)
G124829 NA other upstream 1663010 24261565 ~ 24261823 (-)
G124848 NA other upstream 1693232 24291787 ~ 24339566 (-)
AMCG00002682 NA other upstream 3668497 26267052 ~ 26279621 (-)

Expression


Co-expression Network