G124658


Basic Information

Item Value
gene id G124658
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 22990571 ~ 22991760 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU156237
gtttttttaattaccgGCATTTATTGGTAGCTTTCTATTAAGagggaagaaaatacaaatgataaaaatgtttctcagctgaaaatacagtatttgtaaGTGTGTAGGTTTCACCAAtaaattcaacaaaacaaaatcccagaCCAGGTAAACTTGATGCTGATGGTATTTTAGGCAATGGCAGCCAGATAGTCTTTGACCTCTGCGGGAGAAAGTCTTCTGAACCCTGCTTCATTGCAGATGCCCACCTCGATATTGTCTTCAGTCATCTGACCTTCGAAACTTTCCTGTAATTGAGCAAGACAATGGATCAAAATGCTTTATACTCCCATAACTAATATTCCATAGGCTCTTGCTTTAGAGAGctacataaaaatacaagattGCACTAcagttaatttttttacatcattattttaaatcctcCAGAGTACATTTTTCTATAACAGGAAAGTatcagagaagaagaaaaatgcaactTTTTCTACCCAGGTTTCATCAATGGCAAATAAACTGTTATTCATCCAGGGAATACACCATATTCTGGTTGCATCACTGAAGggattttataataatttgaaaagcaaGCTCCCTTCATGATTAACtcaatatcaaatatattttttctttgatcATACACAGATGTTCAAATGTCATTCACTCAAATACAGATTCCCATTGTGCATAGTTTAAACAACTGGAGCAACCTGTGATTAAATTGCCTCAACTTtgtcaacaataaaaacacaacatacatAACTCTCAAGGCAGAAGAAGAAGGTCCATAGGTTCTAGCTTCTAGAATGACTATCTCCATGTATGAGCAGGTATGGTGTTTTGGCAAACTGAATAACTCTGAAACTAAAAGAGGTATACTCTTATTACACCCTGGGTATTCTATTACCTTTAGCGTTAAGATTGCTGTGTGAATGGCATCTTCAAGCTCCAGATCTTCATTGTACCTTTTTTTCAAggaatgtttttccatttacataGTTCTTCCCCATTGCAGTTGCTTTCCAAGCAAAATATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156237 True 1034 lncRNA 0.35 2 22990571 22991760

Neighbor

gene id symbol gene type direction distance location
AMCG00002613 NA coding upstream 38743 22947203 ~ 22951828 (+)
AMCG00002612 LOC103360969 coding upstream 44650 22927289 ~ 22945921 (+)
AMCG00002618 NA coding upstream 84059 22904029 ~ 22906512 (+)
AMCG00002609 NA coding upstream 394283 22564822 ~ 22596288 (+)
AMCG00002607 NA coding upstream 442431 22484287 ~ 22548140 (+)
AMCG00002621 NA coding downstream 5113 22996873 ~ 22999485 (+)
AMCG00002619 NA coding downstream 36876 23028636 ~ 23033585 (+)
AMCG00002624 NA coding downstream 52064 23043824 ~ 23055716 (+)
AMCG00002620 NA coding downstream 65022 23056782 ~ 23067800 (+)
AMCG00002630 NA coding downstream 415806 23407566 ~ 23407966 (+)
G124601 NA non-coding upstream 77892 22859923 ~ 22912679 (+)
G124590 NA non-coding upstream 337629 22652726 ~ 22652942 (+)
G124534 NA non-coding upstream 551790 22436949 ~ 22438781 (+)
G124494 NA non-coding upstream 652613 22333949 ~ 22337958 (+)
G124408 tatdn1 non-coding upstream 1179750 21805620 ~ 21810821 (+)
G124666 LOC106595597,LOC106595600,LOC106597717,LOC105016543 non-coding downstream 10028 23001788 ~ 23002232 (+)
G124667 NA non-coding downstream 11231 23002991 ~ 23003252 (+)
G124668 NA non-coding downstream 19675 23011435 ~ 23012000 (+)
G124687 NA non-coding downstream 226570 23218330 ~ 23276775 (+)
G124740 NA non-coding downstream 430213 23421973 ~ 23436320 (+)
AMCG00002622 NA other upstream 407 22987545 ~ 22990164 (+)
AMCG00002573 NA other upstream 2657541 20241848 ~ 20333030 (+)
AMCG00002561 NA other upstream 3857004 19130067 ~ 19133567 (+)
AMCG00002562 LOC106579813 other upstream 3862624 19073693 ~ 19127947 (+)
G123989 NA other upstream 4152040 18832014 ~ 18838531 (+)
AMCG00002623 sqle,LOC106579093,LOC106605546,LOC107686341 other downstream 76364 23068124 ~ 23180043 (+)
G124689 NA other downstream 160888 23152648 ~ 23290535 (+)
G124769 NA other downstream 686175 23677935 ~ 23681385 (+)
G124863 NA other downstream 1430492 24422252 ~ 24422613 (+)
AMCG00002650 NA other downstream 1770124 24761884 ~ 24776815 (+)

Expression


Co-expression Network