G124687


Basic Information

Item Value
gene id G124687
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 23218330 ~ 23276775 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU156273
CCTTCTCCCCACAGGCTGTCTCTCTGTCAAGTCTCAGAGGAAGGCTGTGCAGCCGTGGCCTCGGCTCTGCGCTCAAACCCCTCAACTCTGAGAGAGCTGGATATAAGCTACAATCACCCAGGGGACTCAGGAGTGACGCTGCTCTCTGCTGGACTGAGGGATCCCAAGTGTAAACTAGAGAAACTGCTGCTGTCAGGCTGTGGGATCACAGAGGAAGGCTGTGCAGCCCTGGCTTCAGCTCTCTGTTCAAACCCCTCAACTCTGAGAGAGCTGGATCTGAGCTCCAATCGCCCAGGGGACTCAGGAGTGACGCTGCTCTCTGCTGGACTGAGGGATCCCAACTGTAAACTAGAGAAACTACTGTAAGTGGAgactgtgtgattgtgtgacaGTGTGATGGTTAAACTACAGGCTGTTATGGGAGATAGTCTCCCATGGAGAGAATACTCCATGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156273 True 456 lncRNA 0.54 2 23218330 23276775

Neighbor

gene id symbol gene type direction distance location
AMCG00002620 NA coding upstream 150530 23056782 ~ 23067800 (+)
AMCG00002624 NA coding upstream 162614 23043824 ~ 23055716 (+)
AMCG00002619 NA coding upstream 184745 23028636 ~ 23033585 (+)
AMCG00002621 NA coding upstream 218845 22996873 ~ 22999485 (+)
AMCG00002613 NA coding upstream 266502 22947203 ~ 22951828 (+)
AMCG00002630 NA coding downstream 130791 23407566 ~ 23407966 (+)
AMCG00002631 NA coding downstream 376197 23652972 ~ 23677437 (+)
AMCG00002635 lrp12,LOC107754924,LOC107714470,LOC107689529 coding downstream 690803 23967578 ~ 23985386 (+)
AMCG00002637 dpys coding downstream 720472 23997247 ~ 24007711 (+)
AMCG00002636 dpys,LOC107686378 coding downstream 742729 24019504 ~ 24036531 (+)
G124668 NA non-coding upstream 206330 23011435 ~ 23012000 (+)
G124667 NA non-coding upstream 215078 23002991 ~ 23003252 (+)
G124666 LOC106595597,LOC106595600,LOC106597717,LOC105016543 non-coding upstream 216098 23001788 ~ 23002232 (+)
G124658 NA non-coding upstream 226570 22990571 ~ 22991760 (+)
G124601 NA non-coding upstream 305651 22859923 ~ 22912679 (+)
G124740 NA non-coding downstream 145198 23421973 ~ 23436320 (+)
G124750 NA non-coding downstream 329762 23606537 ~ 23606839 (+)
G124770 zfpm2 non-coding downstream 405238 23682013 ~ 23682226 (+)
G124774 NA non-coding downstream 552895 23829670 ~ 23829984 (+)
G124783 NA non-coding downstream 710927 23987702 ~ 24004361 (+)
AMCG00002623 sqle,LOC106579093,LOC106605546,LOC107686341 other upstream 38287 23068124 ~ 23180043 (+)
AMCG00002622 NA other upstream 228166 22987545 ~ 22990164 (+)
AMCG00002573 NA other upstream 2885300 20241848 ~ 20333030 (+)
AMCG00002561 NA other upstream 4084763 19130067 ~ 19133567 (+)
AMCG00002562 LOC106579813 other upstream 4090383 19073693 ~ 19127947 (+)
G124769 NA other downstream 401160 23677935 ~ 23681385 (+)
G124863 NA other downstream 1145477 24422252 ~ 24422613 (+)
AMCG00002650 NA other downstream 1485109 24761884 ~ 24776815 (+)
AMCG00002661 znf706,LOC103394271,LOC100712275,LOC103364770,LOC106534503,LOC107088369 other downstream 2098167 25374942 ~ 25384312 (+)
AMCG00002684 rpl30,LOC107702100,LOC107568279 other downstream 2998539 26275314 ~ 26279137 (+)

Expression


Co-expression Network