G124862


Basic Information

Item Value
gene id G124862
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 24411014 ~ 24411341 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU156497
ccaagtctttgccgacaacagaagagttaaactgggagaaggagattgagccgtacgaagaattcttttaaaggactttattaaataaagaactttacagactgtgctgcccgcctgtgcccacctgatcagtggagttttacagctggacaattgactaagtcgactgaatacgaaagtgtcagtcatttaaatagctatttgagtcttaagaaacttgacccttggaacgaacagggccctgctttcctcaaagacttcaTCTTCAAGTAATTACtgtggaaaccctgcttacaaagaagattttgtgcacaaccttggagccttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156497 True 328 lncRNA 0.42 1 24411014 24411341

Neighbor

gene id symbol gene type direction distance location
AMCG00002642 NA coding upstream 35000 24369884 ~ 24376014 (+)
AMCG00002636 dpys,LOC107686378 coding upstream 374483 24019504 ~ 24036531 (+)
AMCG00002637 dpys coding upstream 403303 23997247 ~ 24007711 (+)
AMCG00002635 lrp12,LOC107754924,LOC107714470,LOC107689529 coding upstream 425628 23967578 ~ 23985386 (+)
AMCG00002631 NA coding upstream 733577 23652972 ~ 23677437 (+)
AMCG00002646 NA coding downstream 94952 24506293 ~ 24517840 (+)
AMCG00002649 NA coding downstream 265965 24677306 ~ 24679989 (+)
AMCG00002657 NA coding downstream 527525 24938866 ~ 24949499 (+)
AMCG00002656 LOC107596739 coding downstream 555646 24966987 ~ 24978576 (+)
AMCG00002659 NA coding downstream 718275 25129616 ~ 25134264 (+)
G124860 NA non-coding upstream 4036 24404476 ~ 24406978 (+)
G124856 NA non-coding upstream 18663 24387909 ~ 24392351 (+)
G124831 NA non-coding upstream 132374 24278434 ~ 24278640 (+)
G124823 NA non-coding upstream 149173 24261548 ~ 24261841 (+)
G124783 NA non-coding upstream 406653 23987702 ~ 24004361 (+)
G124908 NA non-coding downstream 168001 24579342 ~ 24581696 (+)
G124910 NA non-coding downstream 195955 24607296 ~ 24607534 (+)
G124965 NA non-coding downstream 533897 24945238 ~ 24963480 (+)
G124999 NA non-coding downstream 727639 25138980 ~ 25139272 (+)
G125005 NA non-coding downstream 888360 25299701 ~ 25303155 (+)
G124769 NA other upstream 729629 23677935 ~ 23681385 (+)
G124689 NA other upstream 1120479 23152648 ~ 23290535 (+)
AMCG00002623 sqle,LOC106579093,LOC106605546,LOC107686341 other upstream 1230971 23068124 ~ 23180043 (+)
AMCG00002622 NA other upstream 1420850 22987545 ~ 22990164 (+)
AMCG00002573 NA other upstream 4077984 20241848 ~ 20333030 (+)
G124863 NA other downstream 10911 24422252 ~ 24422613 (+)
AMCG00002650 NA other downstream 350543 24761884 ~ 24776815 (+)
AMCG00002661 znf706,LOC103394271,LOC100712275,LOC103364770,LOC106534503,LOC107088369 other downstream 963601 25374942 ~ 25384312 (+)
AMCG00002684 rpl30,LOC107702100,LOC107568279 other downstream 1863973 26275314 ~ 26279137 (+)
G125219 NA other downstream 1950871 26362212 ~ 26369525 (+)

Expression


Co-expression Network