G124873


Basic Information

Item Value
gene id G124873
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 24411029 ~ 24411336 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU156515
ctccaaggttgtgcacaaaatcttctttgtaagcagggtttccacaGTAATTACTTGAAGAtgaagtctttgaggaaagcagggccctgttcgttccaagggtcaagtttcttaagactcaaatagctatttaaatgactgacactttcgtattcagtcgacttagtcaattgtccagctgtaaaactccactgatcaggtgggcacaggcgggcagcacagtctgtaaagttctttatttaataaagtcctttaaaagaattcttcgtacggctcaatctccttctcccagtttaactcttctgttg

Function

GO:

id name namespace
GO:0048514 blood vessel morphogenesis biological_process
GO:0002040 sprouting angiogenesis biological_process
GO:0001525 angiogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156515 True 308 lncRNA 0.41 1 24411029 24411336

Neighbor

gene id symbol gene type direction distance location
AMCG00002645 NA coding downstream 4049 24388134 ~ 24406980 (-)
AMCG00002643 cthrc1,LOC107746934,LOC106605648,LOC106578543 coding downstream 24274 24377731 ~ 24386755 (-)
AMCG00002644 LOC104967060 coding downstream 41247 24348880 ~ 24369782 (-)
AMCG00002641 NA coding downstream 199672 24195721 ~ 24211357 (-)
AMCG00002640 NA coding downstream 227522 24140560 ~ 24183507 (-)
AMCG00002647 mc5r coding upstream 275237 24686573 ~ 24687842 (-)
AMCG00002648 NA coding upstream 338873 24750209 ~ 24760885 (-)
AMCG00002651 NA coding upstream 364929 24776265 ~ 24786604 (-)
AMCG00002652 NA coding upstream 400020 24811356 ~ 24834198 (-)
AMCG00002654 NA coding upstream 473650 24884986 ~ 24916583 (-)
G124779 NA non-coding downstream 482879 23873678 ~ 23928150 (-)
G124765 NA non-coding downstream 747457 23655984 ~ 23663572 (-)
G124669 NA non-coding downstream 1411921 22996819 ~ 22999108 (-)
G124591 NA non-coding downstream 1757310 22653482 ~ 22653719 (-)
G124582 NA non-coding downstream 1812474 22597999 ~ 22598555 (-)
G124907 NA non-coding upstream 164829 24576165 ~ 24577131 (-)
G124975 NA non-coding upstream 536814 24948150 ~ 24950358 (-)
G125036 NA non-coding upstream 963544 25374880 ~ 25433728 (-)
G125035 LOC108241327,LOC106932681,LOC103371419,LOC103151587 non-coding upstream 1039879 25451215 ~ 25453998 (-)
G125075 NA non-coding upstream 1198781 25610117 ~ 25612297 (-)
G124848 NA other downstream 71463 24291787 ~ 24339566 (-)
G124829 NA other downstream 149206 24261565 ~ 24261823 (-)
G124719 NA other downstream 1114914 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other downstream 1218373 23181921 ~ 23192656 (-)
AMCG00002596 NA other downstream 2508432 21901292 ~ 21902597 (-)
AMCG00002682 NA other upstream 1855716 26267052 ~ 26279621 (-)
AMCG00002688 NA other upstream 1872004 26283340 ~ 26305923 (-)
AMCG00002694 NA other upstream 2202140 26613476 ~ 26664767 (-)
AMCG00002705 klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 other upstream 2443557 26854893 ~ 26875246 (-)

Expression


Co-expression Network