G124907


Basic Information

Item Value
gene id G124907
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 24576165 ~ 24577131 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU156550
ACTGAATAATCAATCCATTGCAAGGGAGAAGGGCAGCGAACTGGTAAGCCTGTCCGAGGCTGTACCTGCTAAGGGGGTCTCGACTGAACCAGTTCTGCAAAGAAGAAATGCTCTACTTTAGGAATGTGTGTTGCttttacacaaagaaaaatctattttattttatttctctagGAACCTTTGCCTGTAAACTCTCAGAACTACATCATGAACAACTTGAAAATTGTCATTGACATTTCTTCAGCATTATCTACTTTAAAAGTTGCCATTGGGTTCCTAGCTTTGAGAATTGGAGACCCAGAAGAGTTGCTTATTGACTACATCAAAAAGGATCTGAGAATGGAAGACAGAGCACAAACTCTGAATTCACCGGTCTTACAAACAAGCAAGGTGAAGCACATTAAATCACTCTGGCAGTTGCTTTCAACTAAACGATCTGTATTGCTTGTACAGATGAATCAGGTAATTCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156550 True 472 lncRNA 0.40 2 24576165 24577131

Neighbor

gene id symbol gene type direction distance location
AMCG00002645 NA coding downstream 169185 24388134 ~ 24406980 (-)
AMCG00002643 cthrc1,LOC107746934,LOC106605648,LOC106578543 coding downstream 189410 24377731 ~ 24386755 (-)
AMCG00002644 LOC104967060 coding downstream 206383 24348880 ~ 24369782 (-)
AMCG00002641 NA coding downstream 364808 24195721 ~ 24211357 (-)
AMCG00002640 NA coding downstream 392658 24140560 ~ 24183507 (-)
AMCG00002647 mc5r coding upstream 109442 24686573 ~ 24687842 (-)
AMCG00002648 NA coding upstream 173078 24750209 ~ 24760885 (-)
AMCG00002651 NA coding upstream 199134 24776265 ~ 24786604 (-)
AMCG00002652 NA coding upstream 234225 24811356 ~ 24834198 (-)
AMCG00002654 NA coding upstream 307855 24884986 ~ 24916583 (-)
G124873 NA non-coding downstream 164829 24411029 ~ 24411336 (-)
G124779 NA non-coding downstream 648015 23873678 ~ 23928150 (-)
G124765 NA non-coding downstream 912593 23655984 ~ 23663572 (-)
G124669 NA non-coding downstream 1577057 22996819 ~ 22999108 (-)
G124591 NA non-coding downstream 1922446 22653482 ~ 22653719 (-)
G124975 NA non-coding upstream 371019 24948150 ~ 24950358 (-)
G125036 NA non-coding upstream 797749 25374880 ~ 25433728 (-)
G125035 LOC108241327,LOC106932681,LOC103371419,LOC103151587 non-coding upstream 874084 25451215 ~ 25453998 (-)
G125075 NA non-coding upstream 1032986 25610117 ~ 25612297 (-)
G125160 NA non-coding upstream 1549423 26126554 ~ 26130462 (-)
G124848 NA other downstream 236599 24291787 ~ 24339566 (-)
G124829 NA other downstream 314342 24261565 ~ 24261823 (-)
G124719 NA other downstream 1280050 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other downstream 1383509 23181921 ~ 23192656 (-)
AMCG00002596 NA other downstream 2673568 21901292 ~ 21902597 (-)
AMCG00002682 NA other upstream 1689921 26267052 ~ 26279621 (-)
AMCG00002688 NA other upstream 1706209 26283340 ~ 26305923 (-)
AMCG00002694 NA other upstream 2036345 26613476 ~ 26664767 (-)
AMCG00002705 klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 other upstream 2277762 26854893 ~ 26875246 (-)

Expression


Co-expression Network