G124975


Basic Information

Item Value
gene id G124975
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 24948150 ~ 24950358 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU156640
CCATCTTCTTCGGCCTTCACTTCAATAAGGAAACCATTCCAGTCTACCCACCTGACTATGTTCCCATCAATACCATCTTTCTCCTTGCTGGACAAGTCTGTGACTGTGATTCTCTCAACCTCTGGCTCGTCCAAGCGAGATATCTTGTTCCCATTAAAGTTCTCCGTGGTGCGTTTGGGAGGCTGGGGTGGAGGAGAATATTCTGTGGCTGGTTCTTGGTCTTCTTTGGATAGCTCCTTCCACTGTTCTGAACAGAAGAGTCTCCCATGATGTACTTGGCACCCTCTATTACTGCCATATAGGAGAACCTCAGCTGGTCGGGAGTCTGGATGAGACCCATTCTGTACTTTCTCATGTCAAGTAAAATCTTCTTGATGTCCACAGAGGTCGGGTCTTTCCTCTTATCCATC
>TU156641
caaaatcagcaggggatcaaatacttttttcccctcactgtatgcgtgtgtgtatctacacatacatacacacactgtatatatgcatatacacagacacacatatcagagagaaagagagagagagagagacacacacacacacacacacacacacacacatatatatatatatatatatatatacatatatacatatacatatatatatatacatatatatatatatacacacacacacatacatacatatacatacatacatatattatacatacagacgtgtgtgtatgtatgtaaaacacttgttttgtttcctgaaaAAACTTTCTTGATCTTggttaaacacatttaaataaaaactagaatAAAAGTCTCACACCTGGGTTTTAAACTTAAATTGGTAGAAATTCAATATAAGGAACaccaaaatttgaaaaaaaacaagactgaaTGGAAATGACTGAAGATGAGGAAAAAGATAAGGAAATaaaaggaatattttaaaagggaCAAGAACAAACAAGTTAACAGAATGTACAGGCTTGAGCTTTTTACCTTTGTACAATCATTCCAAAGTGTATAATACAATTGCTATATTTGGTACTTATTGTGCCTGCAGCCAAAAAGACCCTGAGATGTTACACTGTGATCTTATATGATCTCACTCTGAATTTTACACAGATGTTATTTAGTGCACTGTTTGTTCTCAAGAAATGTGCCACAATTCAGATTACGCAAGTACAATCAGCACCAAATAAAAATTTACCTTTTCTATCGGGTACTGGTGTAGTAAAACATATCTTGCTGTGCAATCTAAGTGCAAgctttaccccccccccccccaccccgccgtCAGTTACTGGAAAAAGATTCTCCAACATATATACAGTCCAACAGAAATtgcagccccagccccagcatTAATGAGAATAGGTTTCCAATATAaccacctttttctttttctttctgtttcacttAACTTCTGTTTCATCTTTTGCACCTTCTGAGTAGTGCCTGCTCTCCTTTCTTCTCTATGTCTTTTGCGGACACTATGTTCCCATCAATACCATCTTTCTCCTTGCTGGACAAGTCTGTGACTGTGATTCTCTCAACCTCTGGCTCGTCCAAGCGAGATATCTTGTTCCCATTAAAGTTCTCCGTGGTGCGTTTGGGAGGCTGGGGTGGAGGAGAATATTCTGTGGCTGGTTCTTGGTCTTCTTTGGATAGCTCCTTCCACTGTTCTGAACAGAAGAGTCTCCCATGATGTACTTGGCACCCTCTATTACTGCCATATAGGAGAACCTCAGCTGGTCGGGAGTCTGGATGAGACCCATTCTGTACTTTCTCATGTCAAGTAAAATCTTCTTGATGTCCACAGAGGTCGGGTCTTTCCTCTTATCCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156640 False 410 lncRNA 0.48 2 24948150 24948841
TU156641 True 1407 lncRNA 0.38 3 24948150 24950358

Neighbor

gene id symbol gene type direction distance location
AMCG00002655 seh1l coding downstream 14399 24921106 ~ 24933751 (-)
AMCG00002654 NA coding downstream 31567 24884986 ~ 24916583 (-)
AMCG00002652 NA coding downstream 113952 24811356 ~ 24834198 (-)
AMCG00002651 NA coding downstream 161546 24776265 ~ 24786604 (-)
AMCG00002648 NA coding downstream 187265 24750209 ~ 24760885 (-)
AMCG00002653 NA coding upstream 13437 24963795 ~ 24966409 (-)
AMCG00002660 NA coding upstream 349343 25299701 ~ 25334662 (-)
AMCG00002665 NA coding upstream 623475 25573833 ~ 25603050 (-)
AMCG00002666 NA coding upstream 653809 25604167 ~ 25611494 (-)
AMCG00002671 vps13b,LOC104942627 coding upstream 697455 25647813 ~ 25676650 (-)
G124907 NA non-coding downstream 371019 24576165 ~ 24577131 (-)
G124873 NA non-coding downstream 536814 24411029 ~ 24411336 (-)
G124779 NA non-coding downstream 1020000 23873678 ~ 23928150 (-)
G124765 NA non-coding downstream 1284578 23655984 ~ 23663572 (-)
G124669 NA non-coding downstream 1949042 22996819 ~ 22999108 (-)
G125036 NA non-coding upstream 424522 25374880 ~ 25433728 (-)
G125035 LOC108241327,LOC106932681,LOC103371419,LOC103151587 non-coding upstream 500857 25451215 ~ 25453998 (-)
G125075 NA non-coding upstream 659759 25610117 ~ 25612297 (-)
G125160 NA non-coding upstream 1176196 26126554 ~ 26130462 (-)
G125178 NA non-coding upstream 1254534 26204892 ~ 26205871 (-)
G124848 NA other downstream 608584 24291787 ~ 24339566 (-)
G124829 NA other downstream 686327 24261565 ~ 24261823 (-)
G124719 NA other downstream 1652035 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other downstream 1755494 23181921 ~ 23192656 (-)
AMCG00002596 NA other downstream 3045553 21901292 ~ 21902597 (-)
AMCG00002682 NA other upstream 1316694 26267052 ~ 26279621 (-)
AMCG00002688 NA other upstream 1332982 26283340 ~ 26305923 (-)
AMCG00002694 NA other upstream 1663118 26613476 ~ 26664767 (-)
AMCG00002705 klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 other upstream 1904535 26854893 ~ 26875246 (-)

Expression


Co-expression Network