G125200


Basic Information

Item Value
gene id G125200
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26242254 ~ 26242531 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU156922
AAGACATCAGTGTAGAACGGGTGCTAGAACCTGGAGGCTGCCAGTTGGAAGTCTATATTCTGTGCAACTAGTTGGTTATTGACTTTGATTGCTGAACTCCATGGGGAGCTATACATGTGACTAAGTGATTTCCAAGGAGATTGACTTCCAGTGCACATGAGTTACCTATTGTTGTCTGGGAGCCTATTGGACTCTGGGTAACCAGGATGGCTTGGGTATATCTGCTCACATTGAAGCCCTTTAATTTACGTAGGTTTGAAAAACTGTTCCAATTGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU156922 True 278 lncRNA 0.44 1 26242254 26242531

Neighbor

gene id symbol gene type direction distance location
AMCG00002680 NA coding downstream 8211 26208270 ~ 26234043 (-)
AMCG00002681 kcns2,LOC102221451 coding downstream 103758 26136957 ~ 26138496 (-)
AMCG00002673 osr2 coding downstream 236897 26002815 ~ 26005357 (-)
AMCG00002672 vps13b coding downstream 252691 25936202 ~ 25989563 (-)
AMCG00002674 LOC106594737,LOC104943785 coding downstream 419552 25788383 ~ 25822702 (-)
AMCG00002679 NA coding upstream 156 26242687 ~ 26260306 (-)
AMCG00002689 NA coding upstream 75812 26318343 ~ 26319376 (-)
AMCG00002687 laptm4b,LOC107702097,LOC107724295,LOC107394696,LOC107565197,LOC105907721 coding upstream 80367 26322898 ~ 26338157 (-)
AMCG00002690 NA coding upstream 121431 26363962 ~ 26375896 (-)
AMCG00002685 rrm2b,LOC107556385,LOC108425040,LOC107394698,LOC106956493 coding upstream 139980 26382511 ~ 26390982 (-)
G125178 NA non-coding downstream 36383 26204892 ~ 26205871 (-)
G125160 NA non-coding downstream 111792 26126554 ~ 26130462 (-)
G125075 NA non-coding downstream 629957 25610117 ~ 25612297 (-)
G125035 LOC108241327,LOC106932681,LOC103371419,LOC103151587 non-coding downstream 788256 25451215 ~ 25453998 (-)
G125036 NA non-coding downstream 808526 25374880 ~ 25433728 (-)
G125269 NA non-coding upstream 253418 26495949 ~ 26498450 (-)
G125291 NA non-coding upstream 413097 26655628 ~ 26655871 (-)
G125297 NA non-coding upstream 419173 26661704 ~ 26663029 (-)
G125361 fam91a1,LOC106570778,LOC106589122,LOC107702086,LOC107724353 non-coding upstream 671176 26913707 ~ 26915965 (-)
G125376 NA non-coding upstream 735153 26977684 ~ 26977920 (-)
G124848 NA other downstream 1902688 24291787 ~ 24339566 (-)
G124829 NA other downstream 1980431 24261565 ~ 24261823 (-)
G124719 NA other downstream 2946139 23085994 ~ 23296115 (-)
AMCG00002629 sqle,LOC106579093,LOC102798444,LOC106605546 other downstream 3049598 23181921 ~ 23192656 (-)
AMCG00002596 NA other downstream 4339657 21901292 ~ 21902597 (-)
AMCG00002682 NA other upstream 24521 26267052 ~ 26279621 (-)
AMCG00002688 NA other upstream 40809 26283340 ~ 26305923 (-)
AMCG00002694 NA other upstream 370945 26613476 ~ 26664767 (-)
AMCG00002705 klhl38a,LOC103030765,LOC106570780,LOC103376378,LOC108424967,LOC107724354,LOC107565193,LOC107702087,LOC104967054 other upstream 612362 26854893 ~ 26875246 (-)

Expression


Co-expression Network